← Back to the gene family browser
Support counts the member genes carrying the term. % of genes is that count over all 104 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR24104 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED | 96 / 104 | 92.3% | 100.0% of 96 | ≥80% support |
| Pfam | PF01436 | NHL | 94 / 104 | 90.4% | 100.0% of 94 | ≥80% support |
| GO | GO:0005515 Molecular Function | protein binding | 95 / 104 | 91.4% | 100.0% of 95 | ≥80% support |
| GO | GO:0000209 Biological Process | protein polyubiquitination | 79 / 104 | 76.0% | 83.2% of 95 | ≥50% support |
| GO | GO:0043161 Biological Process | proteasome-mediated ubiquitin-dependent protein catabolic process | 79 / 104 | 76.0% | 83.2% of 95 | ≥50% support |
| GO | GO:0061630 Molecular Function | ubiquitin protein ligase activity | 79 / 104 | 76.0% | 83.2% of 95 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora intermedia | aint_s0165.g26.t1 | XP_015759584.1 | PREDICTED: E3 ubiquitin-protein ligase TRIM71-like [Acropora digitifera] | – | JBrowse |
