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Support counts the member genes carrying the term. % of genes is that count over all 2,856 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00104 | Hormone_recep — Ligand-binding domain of nuclear hormone receptor | 2479 / 2,856 | 86.8% | 96.0% of 2,583 | ≥80% support |
| Pfam | PF00105 | zf-C4 — Zinc finger, C4 type (two domains) | 2307 / 2,856 | 80.8% | 89.3% of 2,583 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 2355 / 2,856 | 82.5% | 91.5% of 2,574 | ≥80% support |
| GO | GO:0008270 Molecular Function | zinc ion binding | 2330 / 2,856 | 81.6% | 90.5% of 2,574 | ≥80% support |
| GO | GO:0004879 Molecular Function | nuclear receptor activity | 2321 / 2,856 | 81.3% | 90.2% of 2,574 | ≥80% support |
| GO | GO:0003700 Molecular Function | DNA-binding transcription factor activity | 2307 / 2,856 | 80.8% | 89.6% of 2,574 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 2307 / 2,856 | 80.8% | 89.6% of 2,574 | ≥80% support |
| GO | GO:0043565 Molecular Function | sequence-specific DNA binding | 2307 / 2,856 | 80.8% | 89.6% of 2,574 | ≥80% support |
| PANTHER | PTHR24083 | NUCLEAR HORMONE RECEPTOR | 1684 / 2,856 | 59.0% | 65.4% of 2,575 | ≥50% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 1971 / 2,856 | 69.0% | 76.6% of 2,574 | ≥50% support |
| GO | GO:0030154 Biological Process | cell differentiation | 1694 / 2,856 | 59.3% | 65.8% of 2,574 | ≥50% support |
| GO | GO:0048856 Biological Process | anatomical structure development | 1684 / 2,856 | 59.0% | 65.4% of 2,574 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora loripes | alor_g10486.t1 | XP_015765844.1 | PREDICTED: retinoic acid receptor RXR-like [Acropora digitifera] | Q90416 Retinoic acid receptor RXR-gamma-A OS=Danio rerio OX=7955 GN | JBrowse |
| Acropora loripes | alor_g13544.t1 | XP_029208455.1 | orphan steroid hormone receptor 2 isoform X2 [Acropora millepora] | Q06726 Nuclear receptor subfamily 2 group F member 5 OS=Danio rerio | JBrowse |
| Acropora loripes | alor_g14079.t1 | XP_029203020.2 | retinoic acid receptor RXR-alpha-like [Acropora millepora] | P51128 Retinoic acid receptor RXR-alpha OS=Xenopus laevis OX=8355 G | JBrowse |
| Acropora loripes | alor_g15364.t1 | XP_015780074.1 | PREDICTED: photoreceptor-specific nuclear receptor-like [Acropora digitifera] | Q9TTF0 Photoreceptor-specific nuclear receptor OS=Bos taurus OX=991 | JBrowse |
| Acropora loripes | alor_g19519.t1 | XP_015751728.1 | PREDICTED: hepatocyte nuclear factor 4-gamma-like isoform X2 [Acropora digitifera] | Q9WUU6 Hepatocyte nuclear factor 4-gamma OS=Mus musculus OX=10090 G | JBrowse |
| Acropora loripes | alor_g2609.t1 | XP_044184860.1 | retinoic acid receptor RXR-alpha-B isoform X2 [Acropora millepora] | Q06725 Nuclear receptor subfamily 2 group F member 1-A OS=Danio rer | JBrowse |
| Acropora loripes | alor_g26957.t1 | XP_015763888.1 | PREDICTED: orphan steroid hormone receptor 2-like [Acropora digitifera] | Q90733 COUP transcription factor 2 OS=Gallus gallus OX=9031 GN=NR2F | JBrowse |
| Acropora loripes | alor_g26957.t2 | XP_015763888.1 | PREDICTED: orphan steroid hormone receptor 2-like [Acropora digitifera] | Q90417 Retinoic acid receptor RXR-beta-B OS=Danio rerio OX=7955 GN= | JBrowse |
| Acropora loripes | alor_g3529.t1 | XP_029187385.2 | steroid hormone receptor ERR2 [Acropora millepora] | Q90416 Retinoic acid receptor RXR-gamma-A OS=Danio rerio OX=7955 GN | JBrowse |
| Acropora loripes | alor_g4046.t1 | XP_044163987.1 | nuclear receptor subfamily 2 group E member 1-like [Acropora millepora] | Q9TTF0 Photoreceptor-specific nuclear receptor OS=Bos taurus OX=991 | JBrowse |
| Acropora loripes | alor_g6484.t1 | XP_015752482.1 | PREDICTED: nuclear receptor subfamily 2 group E member 1-like [Acropora digitifera] | Q9TTF0 Photoreceptor-specific nuclear receptor OS=Bos taurus OX=991 | JBrowse |
| Acropora loripes | alor_g6485.t1 | XP_029180457.1 | photoreceptor-specific nuclear receptor-like [Acropora millepora] | Q9TTF0 Photoreceptor-specific nuclear receptor OS=Bos taurus OX=991 | JBrowse |
| Acropora loripes | alor_g8882.t1 | XP_029186102.2 | nuclear receptor subfamily 2 group F member 1-B-like [Acropora millepora] | Q6PH18 Nuclear receptor subfamily 2 group F member 1-B OS=Danio rer | JBrowse |
| Acropora loripes | alor_g8905.t1 | XP_015763963.1 | PREDICTED: COUP transcription factor 2-like isoform X3 [Acropora digitifera] | Q60632 COUP transcription factor 1 OS=Mus musculus OX=10090 GN=Nr2f | JBrowse |
| Acropora loripes | alor_g8905.t2 | XP_015763966.1 | PREDICTED: COUP transcription factor 2-like isoform X4 [Acropora digitifera] | Q60632 COUP transcription factor 1 OS=Mus musculus OX=10090 GN=Nr2f | JBrowse |
