← Back to the gene family browser
Support counts the member genes carrying the term. % of genes is that count over all 2,277 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00058 | Ldl_recept_b — Low-density lipoprotein receptor repeat class B | 1757 / 2,277 | 77.2% | 92.7% of 1,895 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora loripes | alor_g18212.t1 | XP_044163959.1 | low-density lipoprotein receptor-related protein 8-like [Acropora millepora] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Acropora loripes | alor_g18226.t1 | XP_029198182.2 | very low-density lipoprotein receptor-like isoform X1 [Acropora millepora] | P35951 Low-density lipoprotein receptor OS=Mus musculus OX=10090 GN | JBrowse |
| Acropora loripes | alor_g19240.t1 | XP_044166215.1 | uncharacterized protein LOC114950433 [Acropora millepora] | Q07954 Prolow-density lipoprotein receptor-related protein 1 OS=Hom | JBrowse |
| Acropora loripes | alor_g19241.t1 | XP_044166215.1 | uncharacterized protein LOC114950433 [Acropora millepora] | Q91VN0 Low-density lipoprotein receptor-related protein 5 OS=Mus mu | JBrowse |
| Acropora loripes | alor_g19242.t1 | XP_015756293.1 | PREDICTED: uncharacterized protein LOC107335775 [Acropora digitifera] | – | JBrowse |
| Acropora loripes | alor_g19243.t1 | XP_044166215.1 | uncharacterized protein LOC114950433 [Acropora millepora] | P98157 Low-density lipoprotein receptor-related protein 1 OS=Gallus | JBrowse |
| Acropora loripes | alor_g21952.t1 | XP_029190659.2 | very low-density lipoprotein receptor-like [Acropora millepora] | Q14114 Low-density lipoprotein receptor-related protein 8 OS=Homo s | JBrowse |
| Acropora loripes | alor_g21954.t1 | XP_029190659.2 | very low-density lipoprotein receptor-like [Acropora millepora] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Acropora loripes | alor_g23298.t1 | XP_029190659.2 | very low-density lipoprotein receptor-like [Acropora millepora] | Q6X0I2 Vitellogenin receptor OS=Solenopsis invicta OX=13686 GN=VgR | JBrowse |