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Support counts the member genes carrying the term. % of genes is that count over all 468 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR15592 | MATRIN 3/NUCLEAR PROTEIN 220-RELATED | 409 / 468 | 87.4% | 100.0% of 409 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 413 / 468 | 88.3% | 99.8% of 414 | ≥80% support |
| GO | GO:0003729 Molecular Function | mRNA binding | 409 / 468 | 87.4% | 98.8% of 414 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 409 / 468 | 87.4% | 98.8% of 414 | ≥80% support |
| GO | GO:0043484 Biological Process | regulation of RNA splicing | 409 / 468 | 87.4% | 98.8% of 414 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 396 / 468 | 84.6% | 95.7% of 414 | ≥80% support |
| Pfam | PF13893 | RRM_5 — RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 341 / 468 | 72.9% | 90.0% of 379 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Actinia mediterranea | ENSQPTP00000029974.1 | none | – | JBrowse | |
| Actinia mediterranea | ENSQPTP00000029984.1 | XP_031557316.1 | polypyrimidine tract-binding protein 3-like isoform X1 [Actinia tenebrosa] | F1LQ48 Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegic | JBrowse |
| Actinia mediterranea | ENSQPTP00000029997.1 | none | – | JBrowse | |
| Actinia mediterranea | ENSQPTP00000035475.1 | XP_031569272.1 | heterogeneous nuclear ribonucleoprotein L-like [Actinia tenebrosa] | P14866 Heterogeneous nuclear ribonucleoprotein L OS=Homo sapiens OX | JBrowse |
| Actinia mediterranea | ENSQPTP00000035639.1 | XP_031569272.1 | heterogeneous nuclear ribonucleoprotein L-like [Actinia tenebrosa] | Q8R081 Heterogeneous nuclear ribonucleoprotein L OS=Mus musculus OX | JBrowse |
| Actinia mediterranea | ENSQPTP00000068410.1 | none | – | JBrowse | |
| Actinia mediterranea | ENSQPTP00000068430.1 | XP_031557316.1 | polypyrimidine tract-binding protein 3-like isoform X1 [Actinia tenebrosa] | F1LQ48 Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegic | JBrowse |
| Actinia mediterranea | ENSQPTP00000068444.1 | none | – | JBrowse | |
| Actinia mediterranea | ENSQPTP00000073154.1 | XP_031569272.1 | heterogeneous nuclear ribonucleoprotein L-like [Actinia tenebrosa] | P14866 Heterogeneous nuclear ribonucleoprotein L OS=Homo sapiens OX | JBrowse |
| Actinia mediterranea | ENSQPTP00000074895.1 | XP_031569272.1 | heterogeneous nuclear ribonucleoprotein L-like [Actinia tenebrosa] | Q8R081 Heterogeneous nuclear ribonucleoprotein L OS=Mus musculus OX | JBrowse |
