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This orthogroup contains 297 genes from 136 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 297 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12603 | CCR4-NOT TRANSCRIPTION COMPLEX RELATED | 216 / 297 | 72.7% | 98.2% of 220 | ≥50% support |
| Pfam | PF14570 | zf-RING_4 — RING/Ubox like zinc-binding domain | 192 / 297 | 64.7% | 96.0% of 200 | ≥50% support |
| GO | GO:0004842 Molecular Function | ubiquitin-protein transferase activity | 216 / 297 | 72.7% | 98.2% of 220 | ≥50% support |
| GO | GO:0016567 Biological Process | protein ubiquitination | 216 / 297 | 72.7% | 98.2% of 220 | ≥50% support |
| GO | GO:0030014 Cellular Component | CCR4-NOT complex | 216 / 297 | 72.7% | 98.2% of 220 | ≥50% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 198 / 297 | 66.7% | 90.0% of 220 | ≥50% support |
| GO | GO:0046872 Molecular Function | metal ion binding | 186 / 297 | 62.6% | 84.6% of 220 | ≥50% support |
| GO | GO:0003723 Molecular Function | RNA binding | 184 / 297 | 62.0% | 83.6% of 220 | ≥50% support |
| KEGG | K10643 | CNOT4, NOT4, MOT2 — Ubiquitin system | 176 / 297 | 59.3% | 97.8% of 180 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Actinia mediterranea | ENSQPTP00000013340.1 | none | – | JBrowse | |
| Actinia mediterranea | ENSQPTP00000013352.1 | XP_031574932.1 | uncharacterized protein LOC116308611 isoform X1 [Actinia tenebrosa] | O95628 CCR4-NOT transcription complex subunit 4 OS=Homo sapiens OX= | JBrowse |
| Actinia mediterranea | ENSQPTP00000013366.1 | none | – | JBrowse | |
| Actinia mediterranea | ENSQPTP00000054010.1 | none | – | JBrowse | |
| Actinia mediterranea | ENSQPTP00000054024.1 | XP_031574932.1 | uncharacterized protein LOC116308611 isoform X1 [Actinia tenebrosa] | O95628 CCR4-NOT transcription complex subunit 4 OS=Homo sapiens OX= | JBrowse |
| Actinia mediterranea | ENSQPTP00000054041.1 | none | – | JBrowse |
