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This orthogroup contains 286 genes from 142 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 286 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 250 / 286 | 87.4% | 100.0% of 250 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 254 / 286 | 88.8% | 100.0% of 254 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 252 / 286 | 88.1% | 99.2% of 254 | ≥80% support |
| PANTHER | PTHR47640 | TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED | 174 / 286 | 60.8% | 70.5% of 247 | ≥50% support |
| GO | GO:0003729 Molecular Function | mRNA binding | 212 / 286 | 74.1% | 83.5% of 254 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Actinia mediterranea | ENSQPTP00000000302.1 | none | – | JBrowse | |
| Actinia mediterranea | ENSQPTP00000000317.1 | none | – | JBrowse | |
| Actinia mediterranea | ENSQPTP00000000326.1 | XP_031557089.1 | nucleolysin TIAR-like isoform X1 [Actinia tenebrosa] | Q01085 Nucleolysin TIAR OS=Homo sapiens OX=9606 GN=TIAL1 PE=1 SV=1 | JBrowse |
| Actinia mediterranea | ENSQPTP00000000369.1 | none | – | JBrowse | |
| Actinia mediterranea | ENSQPTP00000042284.1 | none | – | JBrowse | |
| Actinia mediterranea | ENSQPTP00000042297.1 | none | – | JBrowse | |
| Actinia mediterranea | ENSQPTP00000042309.1 | XP_031557089.1 | nucleolysin TIAR-like isoform X1 [Actinia tenebrosa] | Q01085 Nucleolysin TIAR OS=Homo sapiens OX=9606 GN=TIAL1 PE=1 SV=1 | JBrowse |
| Actinia mediterranea | ENSQPTP00000042320.1 | none | – | JBrowse |
