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This orthogroup contains 269 genes from 134 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 269 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR15597 | ATAXIN 2-BINDING PROTEIN 1-RELATED | 224 / 269 | 83.3% | 100.0% of 224 | ≥80% support |
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 221 / 269 | 82.2% | 100.0% of 221 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 225 / 269 | 83.6% | 100.0% of 225 | ≥80% support |
| GO | GO:0000381 Biological Process | regulation of alternative mRNA splicing, via spliceosome | 224 / 269 | 83.3% | 99.6% of 225 | ≥80% support |
| GO | GO:0003729 Molecular Function | mRNA binding | 224 / 269 | 83.3% | 99.6% of 225 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 224 / 269 | 83.3% | 99.6% of 225 | ≥80% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 224 / 269 | 83.3% | 99.6% of 225 | ≥80% support |
| GO | GO:0007399 Biological Process | nervous system development | 224 / 269 | 83.3% | 99.6% of 225 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 221 / 269 | 82.2% | 98.2% of 225 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Actinia mediterranea | ENSQPTP00000015313.1 | none | – | JBrowse | |
| Actinia mediterranea | ENSQPTP00000015322.1 | none | – | JBrowse | |
| Actinia mediterranea | ENSQPTP00000015334.1 | XP_031571824.1 | RNA binding protein fox-1 homolog 3-like isoform X1 [Actinia tenebrosa] | Q95KI0 RNA binding protein fox-1 homolog 1 OS=Macaca fascicularis O | JBrowse |
| Actinia mediterranea | ENSQPTP00000053324.1 | none | – | JBrowse | |
| Actinia mediterranea | ENSQPTP00000053333.1 | none | – | JBrowse | |
| Actinia mediterranea | ENSQPTP00000053341.1 | XP_031571824.1 | RNA binding protein fox-1 homolog 3-like isoform X1 [Actinia tenebrosa] | Q95KI0 RNA binding protein fox-1 homolog 1 OS=Macaca fascicularis O | JBrowse |
