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This orthogroup contains 148 genes from 95 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 148 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 127 / 148 | 85.8% | 95.5% of 133 | ≥80% support |
| PANTHER | PTHR23043 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA | 80 / 148 | 54.1% | 62.5% of 128 | ≥50% support |
| Pfam | PF08447 | PAS_3 — PAS fold | 80 / 148 | 54.1% | 59.7% of 134 | ≥50% support |
| GO | GO:0046983 Molecular Function | protein dimerization activity | 118 / 148 | 79.7% | 88.7% of 133 | ≥50% support |
| GO | GO:0000977 Molecular Function | RNA polymerase II transcription regulatory region sequence-specific DNA binding | 80 / 148 | 54.1% | 60.2% of 133 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 80 / 148 | 54.1% | 60.2% of 133 | ≥50% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 75 / 148 | 50.7% | 56.4% of 133 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Actinia mediterranea | ENSQPTP00000015784.1 | XP_031567583.1 | neuronal PAS domain-containing protein 2-like [Actinia tenebrosa] | P41738 Aryl hydrocarbon receptor OS=Rattus norvegicus OX=10116 GN=A | JBrowse |
| Actinia mediterranea | ENSQPTP00000054869.1 | XP_031567583.1 | neuronal PAS domain-containing protein 2-like [Actinia tenebrosa] | P41738 Aryl hydrocarbon receptor OS=Rattus norvegicus OX=10116 GN=A | JBrowse |
