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This orthogroup contains 1,954 genes from 149 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 1,954 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11267 | T-BOX PROTEIN-RELATED | 1703 / 1,954 | 87.2% | 99.8% of 1,707 | ≥80% support |
| Pfam | PF00907 | T-box | 1709 / 1,954 | 87.5% | 99.9% of 1,710 | ≥80% support |
| GO | GO:0003700 Molecular Function | DNA-binding transcription factor activity | 1715 / 1,954 | 87.8% | 99.9% of 1,716 | ≥80% support |
| GO | GO:0045893 Biological Process | positive regulation of DNA-templated transcription | 1715 / 1,954 | 87.8% | 99.9% of 1,716 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 1714 / 1,954 | 87.7% | 99.9% of 1,716 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 1714 / 1,954 | 87.7% | 99.9% of 1,716 | ≥80% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 1703 / 1,954 | 87.2% | 99.2% of 1,716 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 1687 / 1,954 | 86.3% | 98.3% of 1,716 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 1687 / 1,954 | 86.3% | 98.3% of 1,716 | ≥80% support |
| GO | GO:0001708 Biological Process | cell fate specification | 1641 / 1,954 | 84.0% | 95.6% of 1,716 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora palmata | XP_074621586.1 | XP_029201693.2 | T-box transcription factor TBX20-like isoform X1 [Acropora millepora] | Q8UW76 T-box transcription factor TBX20 OS=Gallus gallus OX=9031 GN | JBrowse |
| Acropora palmata | XP_074621587.1 | XP_029201694.2 | T-box transcription factor TBX20-like isoform X2 [Acropora millepora] | Q9UMR3 T-box transcription factor TBX20 OS=Homo sapiens OX=9606 GN= | JBrowse |
| Acropora palmata | XP_074621588.1 | XP_015767015.1 | PREDICTED: T-box transcription factor TBX20-like isoform X1 [Acropora digitifera] | Q8UW76 T-box transcription factor TBX20 OS=Gallus gallus OX=9031 GN | JBrowse |
| Acropora palmata | XP_074621589.1 | XP_015767017.1 | PREDICTED: T-box transcription factor TBX20-like isoform X3 [Acropora digitifera] | Q9I9K7 T-box transcription factor TBX20 OS=Danio rerio OX=7955 GN=t | JBrowse |
| Acropora palmata | XP_074621725.1 | XP_015758805.1 | PREDICTED: T-box transcription factor TBX20-like [Acropora digitifera] | Q8UW76 T-box transcription factor TBX20 OS=Gallus gallus OX=9031 GN | JBrowse |
| Acropora palmata | XP_074621726.1 | XP_015758805.1 | PREDICTED: T-box transcription factor TBX20-like [Acropora digitifera] | Q9UMR3 T-box transcription factor TBX20 OS=Homo sapiens OX=9606 GN= | JBrowse |
| Acropora palmata | XP_074622483.1 | BAV53108.1 | brachyury transcription factor [Acropora digitifera] | O15178 T-box transcription factor T OS=Homo sapiens OX=9606 GN=TBXT | JBrowse |
| Acropora palmata | XP_074622484.1 | BAV53108.1 | brachyury transcription factor [Acropora digitifera] | O15178 T-box transcription factor T OS=Homo sapiens OX=9606 GN=TBXT | JBrowse |
| Acropora palmata | XP_074625784.1 | XP_044173014.1 | T-box transcription factor TBX18-like isoform X2 [Acropora millepora] | O95935 T-box transcription factor TBX18 OS=Homo sapiens OX=9606 GN= | JBrowse |
| Acropora palmata | XP_074635682.1 | XP_029192719.2 | T-box transcription factor TBX3-like [Acropora millepora] | O73718 T-box transcription factor TBX3 (Fragment) OS=Gallus gallus | JBrowse |
| Acropora palmata | XP_074635747.1 | XP_029193978.2 | LOW QUALITY PROTEIN: uncharacterized protein LOC114959946 [Acropora millepora] | Q8UW76 T-box transcription factor TBX20 OS=Gallus gallus OX=9031 GN | JBrowse |
| Acropora palmata | XP_074636014.1 | XP_015757893.1 | PREDICTED: T-box transcription factor TBX1-like isoform X1 [Acropora digitifera] | O43435 T-box transcription factor TBX1 OS=Homo sapiens OX=9606 GN=T | JBrowse |
| Acropora palmata | XP_074636015.1 | XP_015757962.1 | PREDICTED: T-box transcription factor TBX1-like isoform X2 [Acropora digitifera] | O43435 T-box transcription factor TBX1 OS=Homo sapiens OX=9606 GN=T | JBrowse |
| Acropora palmata | XP_074636796.1 | XP_015762429.1 | PREDICTED: T-box transcription factor TBX20-like isoform X1 [Acropora digitifera] | Q9IAK8 T-box transcription factor TBX5-A OS=Danio rerio OX=7955 GN= | JBrowse |
| Acropora palmata | XP_074637215.1 | XP_015758362.1 | PREDICTED: T-box transcription factor TBX1-like [Acropora digitifera] | O43435 T-box transcription factor TBX1 OS=Homo sapiens OX=9606 GN=T | JBrowse |
