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Support counts the member genes carrying the term. % of genes is that count over all 1,688 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10270 | SOX TRANSCRIPTION FACTOR | 1513 / 1,688 | 89.6% | 99.6% of 1,519 | ≥80% support |
| Pfam | PF00505 | HMG_box — HMG (high mobility group) box | 1518 / 1,688 | 89.9% | 100.0% of 1,518 | ≥80% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 1333 / 1,688 | 79.0% | 99.7% of 1,337 | ≥50% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 1333 / 1,688 | 79.0% | 99.7% of 1,337 | ≥50% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 1329 / 1,688 | 78.7% | 99.4% of 1,337 | ≥50% support |
| GO | GO:0009653 Biological Process | anatomical structure morphogenesis | 1329 / 1,688 | 78.7% | 99.4% of 1,337 | ≥50% support |
| GO | GO:0030154 Biological Process | cell differentiation | 1329 / 1,688 | 78.7% | 99.4% of 1,337 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora palmata | XP_074615567.1 | XP_029212048.1 | transcription factor SOX-14-like [Acropora millepora] | Q9W7R6 Transcription factor SOX-14 OS=Gallus gallus OX=9031 GN=SOX1 | JBrowse |
| Acropora palmata | XP_074615885.1 | XP_015766886.1 | PREDICTED: transcription factor SOX-14-like [Acropora digitifera] | Q21305 Transcription factor sox-2 OS=Caenorhabditis elegans OX=6239 | JBrowse |
| Acropora palmata | XP_074615886.1 | XP_015766886.1 | PREDICTED: transcription factor SOX-14-like [Acropora digitifera] | Q21305 Transcription factor sox-2 OS=Caenorhabditis elegans OX=6239 | JBrowse |
| Acropora palmata | XP_074615888.1 | XP_015766886.1 | PREDICTED: transcription factor SOX-14-like [Acropora digitifera] | Q21305 Transcription factor sox-2 OS=Caenorhabditis elegans OX=6239 | JBrowse |
| Acropora palmata | XP_074617335.1 | XP_015757625.1 | PREDICTED: transcription factor SOX-14-like [Acropora digitifera] | Q32PP9 Transcription factor Sox-14 OS=Danio rerio OX=7955 GN=sox14 | JBrowse |
| Acropora palmata | XP_074617544.1 | XP_015765332.1 | PREDICTED: sex-determining region Y protein-like [Acropora digitifera] | Q9XS37 Sex-determining region Y protein OS=Bos mutus grunniens OX=3 | JBrowse |
| Acropora palmata | XP_074621598.1 | XP_029201671.2 | protein SOX-15-like [Acropora millepora] | Q20201 Transcription factor sox-3 OS=Caenorhabditis elegans OX=6239 | JBrowse |
| Acropora palmata | XP_074632781.1 | XP_015749486.1 | PREDICTED: transcription factor Sox-2-like [Acropora digitifera] | Q6P0E1 Transcription factor Sox-2 OS=Danio rerio OX=7955 GN=sox2 PE | JBrowse |
| Acropora palmata | XP_074634043.1 | BAV53111.1 | anthozoan specific Sox transcription factor 1 [Acropora digitifera] | Q32PP9 Transcription factor Sox-14 OS=Danio rerio OX=7955 GN=sox14 | JBrowse |
| Acropora palmata | XP_074635191.1 | XP_015770640.1 | PREDICTED: transcription factor Sox-11-like [Acropora digitifera] | P40639 SRY-related protein AES4 (Fragment) OS=Alligator mississippi | JBrowse |
| Acropora palmata | XP_074637354.1 | XP_015768363.1 | PREDICTED: transcription factor Sox-21-A-like [Acropora digitifera] | Q61473 Transcription factor SOX-17 OS=Mus musculus OX=10090 GN=Sox1 | JBrowse |
