← Back to the gene family browser
Support counts the member genes carrying the term. % of genes is that count over all 1,406 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | ubiquitin | 1219 / 1,406 | 86.7% | 99.5% of 1,225 | ≥80% support |
| GO | GO:0005515 Molecular Function | protein binding | 1221 / 1,406 | 86.8% | 99.5% of 1,227 | ≥80% support |
| PANTHER | PTHR10666 | UBIQUITIN | 1076 / 1,406 | 76.5% | 88.6% of 1,214 | ≥50% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 1049 / 1,406 | 74.6% | 85.5% of 1,227 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 1047 / 1,406 | 74.5% | 85.3% of 1,227 | ≥50% support |
| GO | GO:0019941 Biological Process | modification-dependent protein catabolic process | 1047 / 1,406 | 74.5% | 85.3% of 1,227 | ≥50% support |
| GO | GO:0031386 Molecular Function | protein tag activity | 1047 / 1,406 | 74.5% | 85.3% of 1,227 | ≥50% support |
| GO | GO:0031625 Molecular Function | ubiquitin protein ligase binding | 1047 / 1,406 | 74.5% | 85.3% of 1,227 | ≥50% support |
| GO | GO:0016567 Biological Process | protein ubiquitination | 946 / 1,406 | 67.3% | 77.1% of 1,227 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora palmata | XP_074608892.1 | XP_029205684.1 | ubiquitin-like protein 4A isoform X1 [Acropora millepora] | A4QND0 Ubiquitin-like protein 4A OS=Xenopus tropicalis OX=8364 GN=u | JBrowse |
| Acropora palmata | XP_074608893.1 | XP_029205685.1 | ubiquitin-like protein 4A isoform X2 [Acropora millepora] | A4QND0 Ubiquitin-like protein 4A OS=Xenopus tropicalis OX=8364 GN=u | JBrowse |
| Acropora palmata | XP_074618905.1 | XP_029212403.1 | NEDD8 [Acropora millepora] | Q9VJ33 Ubiquitin-like protein NEDD8 OS=Drosophila melanogaster OX=7 | JBrowse |
| Acropora palmata | XP_074618906.1 | XP_029212403.1 | NEDD8 [Acropora millepora] | Q9VJ33 Ubiquitin-like protein NEDD8 OS=Drosophila melanogaster OX=7 | JBrowse |
| Acropora palmata | XP_074627314.1 | AGG36348.1 | ubiquitin-like protein [Stylophora pistillata] | P0CG68 Polyubiquitin-C OS=Sus scrofa OX=9823 GN=UBC PE=2 SV=1 | JBrowse |
| Acropora palmata | XP_074631570.1 | XP_029191203.1 | ubiquitin-40S ribosomal protein S27a [Acropora millepora] | P79781 Ubiquitin-ribosomal protein eS31 fusion protein OS=Gallus ga | JBrowse |
| Acropora palmata | XP_074634390.1 | XP_020611754.1 | ubiquitin-60S ribosomal protein L40 [Orbicella faveolata] | P18101 Ubiquitin-ribosomal protein eL40 fusion protein OS=Drosophil | JBrowse |
