← Back to the gene family browser
This orthogroup contains 838 genes from 126 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 838 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00229 | TNF | 695 / 838 | 82.9% | 95.6% of 727 | ≥80% support |
| GO | GO:0005515 Molecular Function | protein binding | 709 / 838 | 84.6% | 98.8% of 718 | ≥80% support |
| GO | GO:0005164 Molecular Function | tumor necrosis factor receptor binding | 704 / 838 | 84.0% | 98.1% of 718 | ≥80% support |
| GO | GO:0006955 Biological Process | immune response | 704 / 838 | 84.0% | 98.1% of 718 | ≥80% support |
| GO | GO:0016020 Cellular Component | membrane | 704 / 838 | 84.0% | 98.1% of 718 | ≥80% support |
| PANTHER | PTHR11471 | TUMOR NECROSIS FACTOR FAMILY MEMBER | 623 / 838 | 74.3% | 85.7% of 727 | ≥50% support |
| Pfam | PF01391 | Collagen | 518 / 838 | 61.8% | 71.3% of 727 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora palmata | XP_074633766.1 | XP_029184669.2 | uncharacterized protein LOC114952804 [Acropora millepora] | – | JBrowse |
| Acropora palmata | XP_074633767.1 | XP_015756609.1 | PREDICTED: uncharacterized protein LOC107336061 [Acropora digitifera] | – | JBrowse |
| Acropora palmata | XP_074633802.1 | XP_029184669.2 | uncharacterized protein LOC114952804 [Acropora millepora] | – | JBrowse |
| Acropora palmata | XP_074633803.1 | XP_044180109.1 | uncharacterized protein LOC114952864 [Acropora millepora] | – | JBrowse |
| Acropora palmata | XP_074633804.1 | XP_044180109.1 | uncharacterized protein LOC114952864 [Acropora millepora] | – | JBrowse |
| Acropora palmata | XP_074633805.1 | XP_029184733.2 | collagen alpha-1(X) chain-like isoform X1 [Acropora millepora] | – | JBrowse |
| Acropora palmata | XP_074633806.1 | XP_029184741.2 | collagen alpha-1(X) chain-like isoform X2 [Acropora millepora] | – | JBrowse |
| Acropora palmata | XP_074633820.1 | XP_015756681.1 | PREDICTED: uncharacterized protein LOC107336134 isoform X1 [Acropora digitifera] | – | JBrowse |
