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This orthogroup contains 668 genes from 146 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 668 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12341 | 5'->3' EXORIBONUCLEASE | 489 / 668 | 73.2% | 99.2% of 493 | ≥50% support |
| Pfam | PF17846 | XRN_M — Xrn1 helical domain | 440 / 668 | 65.9% | 80.9% of 544 | ≥50% support |
| Pfam | PF03159 | XRN_N — XRN 5'-3' exonuclease N-terminus | 414 / 668 | 62.0% | 76.1% of 544 | ≥50% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 418 / 668 | 62.6% | 97.4% of 429 | ≥50% support |
| GO | GO:0004527 Molecular Function | exonuclease activity | 414 / 668 | 62.0% | 96.5% of 429 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora palmata | XP_074627244.1 | XP_044178010.1 | 5'-3' exoribonuclease 1-like isoform X1 [Acropora millepora] | Q8IZH2 5'-3' exoribonuclease 1 OS=Homo sapiens OX=9606 GN=XRN1 PE=1 | JBrowse |
| Acropora palmata | XP_074627245.1 | XP_044178013.1 | 5'-3' exoribonuclease 1-like isoform X4 [Acropora millepora] | Q8IZH2 5'-3' exoribonuclease 1 OS=Homo sapiens OX=9606 GN=XRN1 PE=1 | JBrowse |
| Acropora palmata | XP_074629060.1 | XP_029211326.2 | 5'-3' exoribonuclease 2-like isoform X1 [Acropora millepora] | Q9DBR1 5'-3' exoribonuclease 2 OS=Mus musculus OX=10090 GN=Xrn2 PE= | JBrowse |
| Acropora palmata | XP_074629061.1 | XP_029211327.2 | 5'-3' exoribonuclease 2-like isoform X2 [Acropora millepora] | Q9DBR1 5'-3' exoribonuclease 2 OS=Mus musculus OX=10090 GN=Xrn2 PE= | JBrowse |
| Acropora palmata | XP_074629063.1 | XP_029211327.2 | 5'-3' exoribonuclease 2-like isoform X2 [Acropora millepora] | Q9DBR1 5'-3' exoribonuclease 2 OS=Mus musculus OX=10090 GN=Xrn2 PE= | JBrowse |
