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This orthogroup contains 353 genes from 144 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 353 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10501 | U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B | 292 / 353 | 82.7% | 99.7% of 293 | ≥80% support |
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 288 / 353 | 81.6% | 99.3% of 290 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 305 / 353 | 86.4% | 100.0% of 305 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 288 / 353 | 81.6% | 94.4% of 305 | ≥80% support |
| KEGG | K25091 | RBPMS — Spliceosome | 215 / 353 | 60.9% | 98.2% of 219 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora palmata | XP_074615525.1 | XP_044172858.1 | RNA-binding protein, mRNA-processing factor 2a-like [Acropora millepora] | Q6DH13 RNA-binding protein, mRNA-processing factor 2a OS=Danio reri | JBrowse |
