← Back to the gene family browser
Support counts the member genes carrying the term. % of genes is that count over all 348 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00046 | Homeodomain | 280 / 348 | 80.5% | 100.0% of 280 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 283 / 348 | 81.3% | 100.0% of 283 | ≥80% support |
| PANTHER | PTHR24340 | HOMEOBOX PROTEIN NKX | 198 / 348 | 56.9% | 80.2% of 247 | ≥50% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 244 / 348 | 70.1% | 86.2% of 283 | ≥50% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 241 / 348 | 69.3% | 85.2% of 283 | ≥50% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 240 / 348 | 69.0% | 84.8% of 283 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 226 / 348 | 64.9% | 79.9% of 283 | ≥50% support |
| GO | GO:0030154 Biological Process | cell differentiation | 203 / 348 | 58.3% | 71.7% of 283 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora palmata | XP_074609397.1 | XP_044183006.1 | uncharacterized protein LOC122963576 [Acropora millepora] | – | JBrowse |
| Acropora palmata | XP_074610083.1 | XP_029185459.2 | homeobox protein zampogna-like [Acropora millepora] | P46692 Homeobox protein CHOX-CAD OS=Gallus gallus OX=9031 GN=CHOX-C | JBrowse |
| Acropora palmata | XP_074627082.1 | XP_029201087.2 | paired mesoderm homeobox protein 1-like [Acropora millepora] | Q8VIB5 BarH-like 2 homeobox protein OS=Mus musculus OX=10090 GN=Bar | JBrowse |
