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This orthogroup contains 340 genes from 146 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 340 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13900 | TRANSCRIPTION INITIATION FACTOR TFIID | 276 / 340 | 81.2% | 99.6% of 277 | ≥80% support |
| GO | GO:0004402 Molecular Function | histone acetyltransferase activity | 276 / 340 | 81.2% | 98.9% of 279 | ≥80% support |
| GO | GO:0005669 Cellular Component | transcription factor TFIID complex | 276 / 340 | 81.2% | 98.9% of 279 | ≥80% support |
| GO | GO:0006366 Biological Process | transcription by RNA polymerase II | 276 / 340 | 81.2% | 98.9% of 279 | ≥80% support |
| GO | GO:0016251 Molecular Function | RNA polymerase II general transcription initiation factor activity | 276 / 340 | 81.2% | 98.9% of 279 | ≥80% support |
| GO | GO:0017025 Molecular Function | TBP-class protein binding | 276 / 340 | 81.2% | 98.9% of 279 | ≥80% support |
| GO | GO:0051123 Biological Process | RNA polymerase II preinitiation complex assembly | 276 / 340 | 81.2% | 98.9% of 279 | ≥80% support |
| Pfam | PF12157 | DUF3591 | 221 / 340 | 65.0% | 81.6% of 271 | ≥50% support |
| Pfam | PF00439 | Bromodomain | 197 / 340 | 57.9% | 72.7% of 271 | ≥50% support |
| Pfam | PF15288 | zf-CCHC_6 — Zinc knuckle | 184 / 340 | 54.1% | 67.9% of 271 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 201 / 340 | 59.1% | 72.0% of 279 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora palmata | XP_074620091.1 | XP_029212286.2 | transcription initiation factor TFIID subunit 1-like isoform X1 [Acropora millepora] | Q60544 Transcription initiation factor TFIID subunit 1 OS=Mesocrice | JBrowse |
| Acropora palmata | XP_074620092.1 | XP_029212287.2 | transcription initiation factor TFIID subunit 1-like isoform X2 [Acropora millepora] | Q60544 Transcription initiation factor TFIID subunit 1 OS=Mesocrice | JBrowse |
