← Back to the gene family browser
Support counts the member genes carrying the term. % of genes is that count over all 325 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR21704 | NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED | 278 / 325 | 85.5% | 99.6% of 279 | ≥80% support |
| GO | GO:0010468 Biological Process | regulation of gene expression | 279 / 325 | 85.9% | 100.0% of 279 | ≥80% support |
| GO | GO:0003682 Molecular Function | chromatin binding | 278 / 325 | 85.5% | 99.6% of 279 | ≥80% support |
| GO | GO:0034087 Biological Process | establishment of mitotic sister chromatid cohesion | 278 / 325 | 85.5% | 99.6% of 279 | ≥80% support |
| GO | GO:0061780 Biological Process | obsolete mitotic cohesin loading | 278 / 325 | 85.5% | 99.6% of 279 | ≥80% support |
| GO | GO:0071169 Biological Process | establishment of protein localization to chromatin | 278 / 325 | 85.5% | 99.6% of 279 | ≥80% support |
| GO | GO:0090694 Cellular Component | Scc2-Scc4 cohesin loading complex | 278 / 325 | 85.5% | 99.6% of 279 | ≥80% support |
| GO | GO:1990414 Biological Process | replication-born double-strand break repair via sister chromatid exchange | 278 / 325 | 85.5% | 99.6% of 279 | ≥80% support |
| Pfam | PF12830 | Nipped-B_C — Sister chromatid cohesion C-terminus | 228 / 325 | 70.2% | 91.6% of 249 | ≥50% support |
| Pfam | PF12765 | Cohesin_HEAT — HEAT repeat associated with sister chromatid cohesion | 208 / 325 | 64.0% | 83.5% of 249 | ≥50% support |
| KEGG | K06672 | SCC2, NIPBL — Chromosome and associated proteins | 176 / 325 | 54.2% | 96.7% of 182 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora palmata | XP_074611278.1 | XP_029198037.2 | LOW QUALITY PROTEIN: nipped-B-like protein [Acropora millepora] | Q6KCD5 Nipped-B-like protein OS=Mus musculus OX=10090 GN=Nipbl PE=1 | JBrowse |
| Acropora palmata | XP_074611279.1 | XP_029198037.2 | LOW QUALITY PROTEIN: nipped-B-like protein [Acropora millepora] | Q6KCD5 Nipped-B-like protein OS=Mus musculus OX=10090 GN=Nipbl PE=1 | JBrowse |
