← Back to the gene family browser
This orthogroup contains 265 genes from 141 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 265 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR31179 | RAB GTPASE-BINDING EFFECTOR PROTEIN | 229 / 265 | 86.4% | 98.3% of 233 | ≥80% support |
| Pfam | PF03528 | Rabaptin | 216 / 265 | 81.5% | 90.4% of 239 | ≥80% support |
| GO | GO:0005096 Molecular Function | GTPase activator activity | 232 / 265 | 87.6% | 98.7% of 235 | ≥80% support |
| GO | GO:0006897 Biological Process | endocytosis | 229 / 265 | 86.4% | 97.5% of 235 | ≥80% support |
| GO | GO:0043231 Cellular Component | intracellular membrane-bounded organelle | 229 / 265 | 86.4% | 97.5% of 235 | ≥80% support |
| GO | GO:0008083 Molecular Function | growth factor activity | 216 / 265 | 81.5% | 91.9% of 235 | ≥80% support |
| Pfam | PF09311 | Rab5-bind — Rabaptin-like protein | 183 / 265 | 69.1% | 76.6% of 239 | ≥50% support |
| Pfam | PF01363 | FYVE | 137 / 265 | 51.7% | 57.3% of 239 | ≥50% support |
| GO | GO:0046872 Molecular Function | metal ion binding | 137 / 265 | 51.7% | 58.3% of 235 | ≥50% support |
| KEGG | K12480 | RABEP1 — Membrane trafficking | 147 / 265 | 55.5% | 98.0% of 150 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora palmata | XP_074635811.1 | XP_015754911.1 | PREDICTED: rab GTPase-binding effector protein 1-like [Acropora digitifera] | O35550 Rab GTPase-binding effector protein 1 OS=Rattus norvegicus O | JBrowse |
| Acropora palmata | XP_074635812.1 | XP_015754911.1 | PREDICTED: rab GTPase-binding effector protein 1-like [Acropora digitifera] | O35550 Rab GTPase-binding effector protein 1 OS=Rattus norvegicus O | JBrowse |
