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This orthogroup contains 167 genes from 110 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 167 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11568 | HEPATOCYTE NUCLEAR FACTOR 1 | 146 / 167 | 87.4% | 99.3% of 147 | ≥80% support |
| Pfam | PF04814 | HNF-1_N — Hepatocyte nuclear factor 1 (HNF-1), N terminus | 144 / 167 | 86.2% | 99.3% of 145 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 147 / 167 | 88.0% | 99.3% of 148 | ≥80% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 146 / 167 | 87.4% | 98.7% of 148 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 146 / 167 | 87.4% | 98.7% of 148 | ≥80% support |
| GO | GO:0001889 Biological Process | liver development | 146 / 167 | 87.4% | 98.7% of 148 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 146 / 167 | 87.4% | 98.7% of 148 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 146 / 167 | 87.4% | 98.7% of 148 | ≥80% support |
| GO | GO:0030073 Biological Process | insulin secretion | 146 / 167 | 87.4% | 98.7% of 148 | ≥80% support |
| GO | GO:0031016 Biological Process | pancreas development | 146 / 167 | 87.4% | 98.7% of 148 | ≥80% support |
| GO | GO:0045893 Biological Process | positive regulation of DNA-templated transcription | 144 / 167 | 86.2% | 97.3% of 148 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora palmata | XP_074635783.1 | XP_015779439.1 | PREDICTED: hepatocyte nuclear factor 1-beta-A-like isoform X1 [Acropora digitifera] | P27889 Hepatocyte nuclear factor 1-beta OS=Mus musculus OX=10090 GN | JBrowse |
| Acropora palmata | XP_074635784.1 | XP_015779440.1 | PREDICTED: hepatocyte nuclear factor 1-alpha-like isoform X2 [Acropora digitifera] | Q90867 Hepatocyte nuclear factor 1-alpha OS=Gallus gallus OX=9031 G | JBrowse |
| Acropora palmata | XP_074635785.1 | XP_015779440.1 | PREDICTED: hepatocyte nuclear factor 1-alpha-like isoform X2 [Acropora digitifera] | Q90867 Hepatocyte nuclear factor 1-alpha OS=Gallus gallus OX=9031 G | JBrowse |
