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This orthogroup contains 11,650 genes from 149 species (11,653 sequences — 3 extra sequences share a gene identifier with another member, so they are not counted twice). The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 11,650 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR22906 | PROPERDIN | 6001 / 11,650 | 51.5% | 61.1% of 9,822 | ≥50% support |
| Pfam | PF00090 | TSP_1 — Thrombospondin type 1 domain | 6586 / 11,650 | 56.5% | 65.4% of 10,065 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Astrangia poculata | evm.model.Ap1.1264 | XP_020625948.1 | coadhesin-like isoform X3 [Orbicella faveolata] | Q8CGM1 Adhesion G protein-coupled receptor B2 OS=Mus musculus OX=10 | JBrowse |
| Astrangia poculata | evm.model.Ap1.1600 | XP_020629634.1 | SCO-spondin-like [Orbicella faveolata] | Q96RW7 Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2 | JBrowse |
| Astrangia poculata | evm.model.Ap1.1710 | XP_027058955.1 | A disintegrin and metalloproteinase with thrombospondin motifs adt-1-like isoform X3 [Pocillopora damicornis] | D3YXG0 Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1 | JBrowse |
| Astrangia poculata | evm.model.Ap1.3441 | XP_020630158.1 | thrombospondin-1-like [Orbicella faveolata] | D3YXG0 Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1 | JBrowse |
| Astrangia poculata | evm.model.Ap1.3447 | XP_020630187.1 | coadhesin-like isoform X1 [Orbicella faveolata] | Q96RW7 Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2 | JBrowse |
| Astrangia poculata | evm.model.Ap1.3447.1.5f15e3df | XP_020630188.1 | coadhesin-like isoform X2 [Orbicella faveolata] | Q96RW7 Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2 | JBrowse |
| Astrangia poculata | evm.model.Ap1.3734 | XP_020615815.1 | coadhesin-like [Orbicella faveolata] | Q28178 Thrombospondin-1 OS=Bos taurus OX=9913 GN=THBS1 PE=2 SV=2 | JBrowse |
| Astrangia poculata | evm.model.Ap10.244 | XP_020631997.1 | coadhesin-like [Orbicella faveolata] | B3EWZ3 Coadhesin (Fragment) OS=Acropora millepora OX=45264 PE=1 SV= | JBrowse |
| Astrangia poculata | evm.model.Ap10.741 | XP_020631994.1 | coadhesin-like, partial [Orbicella faveolata] | B3EWZ3 Coadhesin (Fragment) OS=Acropora millepora OX=45264 PE=1 SV= | JBrowse |
| Astrangia poculata | evm.model.Ap10.742 | XP_020631997.1 | coadhesin-like [Orbicella faveolata] | B3EWZ3 Coadhesin (Fragment) OS=Acropora millepora OX=45264 PE=1 SV= | JBrowse |
| Astrangia poculata | evm.model.Ap11.1232 | XP_020602925.1 | uncharacterized protein LOC110041943 [Orbicella faveolata] | B3EWZ3 Coadhesin (Fragment) OS=Acropora millepora OX=45264 PE=1 SV= | JBrowse |
| Astrangia poculata | evm.model.Ap11.1241 | XP_022795633.1 | uncharacterized protein LOC111334203 [Stylophora pistillata] | Q96RW7 Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2 | JBrowse |
| Astrangia poculata | evm.model.Ap11.1634 | KAJ7373188.1 | hypothetical protein OS493_014336 [Desmophyllum pertusum] | Q8AV58 Protein sidekick-1 OS=Gallus gallus OX=9031 GN=SDK1 PE=1 SV= | JBrowse |
| Astrangia poculata | evm.model.Ap11.1635 | KAJ7373187.1 | hypothetical protein OS493_014335 [Desmophyllum pertusum] | Q8AV58 Protein sidekick-1 OS=Gallus gallus OX=9031 GN=SDK1 PE=1 SV= | JBrowse |
| Astrangia poculata | evm.model.Ap11.368 | CAH3028561.1 | unnamed protein product [Porites evermanni] | Q9U8W8 Techylectin-5A OS=Tachypleus tridentatus OX=6853 PE=1 SV=1 | JBrowse |
| Astrangia poculata | evm.model.Ap11.369 | CAH3152448.1 | unnamed protein product [Pocillopora meandrina] | Q3UH53 Protein sidekick-1 OS=Mus musculus OX=10090 GN=Sdk1 PE=1 SV= | JBrowse |
| Astrangia poculata | evm.model.Ap11.614 | XP_020630313.1 | uncharacterized protein LOC110067341 [Orbicella faveolata] | D8VNS7 Ryncolin-1 OS=Cerberus rynchops OX=46267 PE=1 SV=1 | JBrowse |
| Astrangia poculata | evm.model.Ap11.616 | XP_020630313.1 | uncharacterized protein LOC110067341 [Orbicella faveolata] | B3EWZ5 MAM and LDL-receptor class A domain-containing protein 1 (Fr | JBrowse |
| Astrangia poculata | evm.model.Ap11.617 | XP_020630313.1 | uncharacterized protein LOC110067341 [Orbicella faveolata] | P23468 Receptor-type tyrosine-protein phosphatase delta OS=Homo sap | JBrowse |
| Astrangia poculata | evm.model.Ap11.618 | CAH3119165.1 | unnamed protein product [Porites lobata] | O97394 Protein sidekick OS=Drosophila melanogaster OX=7227 GN=sdk P | JBrowse |
