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Support counts the member genes carrying the term. % of genes is that count over all 2,690 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF01436 | NHL | 2020 / 2,690 | 75.1% | 81.4% of 2,483 | ≥50% support |
| Pfam | PF00643 | zf-B_box — B-box zinc finger | 1850 / 2,690 | 68.8% | 74.5% of 2,483 | ≥50% support |
| Pfam | PF00630 | Filamin | 1779 / 2,690 | 66.1% | 71.7% of 2,483 | ≥50% support |
| Pfam | PF13445 | zf-RING_UBOX — RING-type zinc-finger | 1656 / 2,690 | 61.6% | 66.7% of 2,483 | ≥50% support |
| GO | GO:0005515 Molecular Function | protein binding | 2120 / 2,690 | 78.8% | 87.4% of 2,425 | ≥50% support |
| GO | GO:0008270 Molecular Function | zinc ion binding | 2004 / 2,690 | 74.5% | 82.6% of 2,425 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Astrangia poculata | evm.model.Ap10.86 | XP_020610334.1 | E3 ubiquitin-protein ligase TRIM71-like [Orbicella faveolata] | – | JBrowse |
| Astrangia poculata | evm.model.Ap11.1451 | XP_020632041.1 | tripartite motif-containing protein 2-like [Orbicella faveolata] | Q6PFY8 E3 ubiquitin-protein ligase TRIM45 OS=Mus musculus OX=10090 | JBrowse |
| Astrangia poculata | evm.model.Ap11.1453 | XP_020632041.1 | tripartite motif-containing protein 2-like [Orbicella faveolata] | Q56R14 E3 ubiquitin-protein ligase TRIM33 OS=Xenopus laevis OX=8355 | JBrowse |
| Astrangia poculata | evm.model.Ap11.1455 | XP_020632239.1 | E3 ubiquitin-protein ligase TRIM71-like [Orbicella faveolata] | Q9H8W5 E3 ubiquitin-protein ligase TRIM45 OS=Homo sapiens OX=9606 G | JBrowse |
| Astrangia poculata | evm.model.Ap11.1457 | XP_020632239.1 | E3 ubiquitin-protein ligase TRIM71-like [Orbicella faveolata] | Q9H8W5 E3 ubiquitin-protein ligase TRIM45 OS=Homo sapiens OX=9606 G | JBrowse |
| Astrangia poculata | evm.model.Ap11.1504_evm.model.Ap11.1506 | XP_020610333.1 | E3 ubiquitin-protein ligase TRIM71-like [Orbicella faveolata] | Q6PFY8 E3 ubiquitin-protein ligase TRIM45 OS=Mus musculus OX=10090 | JBrowse |
| Astrangia poculata | evm.model.Ap11.1664 | XP_020632239.1 | E3 ubiquitin-protein ligase TRIM71-like [Orbicella faveolata] | Q9H8W5 E3 ubiquitin-protein ligase TRIM45 OS=Homo sapiens OX=9606 G | JBrowse |
| Astrangia poculata | evm.model.Ap11.1665 | XP_020632239.1 | E3 ubiquitin-protein ligase TRIM71-like [Orbicella faveolata] | Q56R14 E3 ubiquitin-protein ligase TRIM33 OS=Xenopus laevis OX=8355 | JBrowse |
| Astrangia poculata | evm.model.Ap11.1666 | XP_020632239.1 | E3 ubiquitin-protein ligase TRIM71-like [Orbicella faveolata] | D2GXS7 Tripartite motif-containing protein 2 OS=Ailuropoda melanole | JBrowse |
| Astrangia poculata | evm.model.Ap11.1668 | XP_020632239.1 | E3 ubiquitin-protein ligase TRIM71-like [Orbicella faveolata] | Q56R14 E3 ubiquitin-protein ligase TRIM33 OS=Xenopus laevis OX=8355 | JBrowse |
| Astrangia poculata | evm.model.Ap11.1669 | XP_020610334.1 | E3 ubiquitin-protein ligase TRIM71-like [Orbicella faveolata] | – | JBrowse |
| Astrangia poculata | evm.model.Ap11.1670 | XP_020632239.1 | E3 ubiquitin-protein ligase TRIM71-like [Orbicella faveolata] | – | JBrowse |
| Astrangia poculata | evm.model.Ap11.1671 | XP_020632239.1 | E3 ubiquitin-protein ligase TRIM71-like [Orbicella faveolata] | Q9H8W5 E3 ubiquitin-protein ligase TRIM45 OS=Homo sapiens OX=9606 G | JBrowse |
| Astrangia poculata | evm.model.Ap11.728 | XP_020603836.1 | E3 ubiquitin-protein ligase TRIM71-like [Orbicella faveolata] | O70277 Tripartite motif-containing protein 3 OS=Rattus norvegicus O | JBrowse |
| Astrangia poculata | evm.model.Ap12.2395 | XP_020602060.1 | E3 ubiquitin-protein ligase TRIM71-like [Orbicella faveolata] | – | JBrowse |
| Astrangia poculata | evm.model.Ap12.2396 | XP_020602060.1 | E3 ubiquitin-protein ligase TRIM71-like [Orbicella faveolata] | D2GXS7 Tripartite motif-containing protein 2 OS=Ailuropoda melanole | JBrowse |
| Astrangia poculata | evm.model.Ap12.2583 | XP_020602060.1 | E3 ubiquitin-protein ligase TRIM71-like [Orbicella faveolata] | D2GXS7 Tripartite motif-containing protein 2 OS=Ailuropoda melanole | JBrowse |
| Astrangia poculata | evm.model.Ap12.2584 | XP_020602060.1 | E3 ubiquitin-protein ligase TRIM71-like [Orbicella faveolata] | D2GXS7 Tripartite motif-containing protein 2 OS=Ailuropoda melanole | JBrowse |
| Astrangia poculata | evm.model.Ap12.2585 | XP_020602060.1 | E3 ubiquitin-protein ligase TRIM71-like [Orbicella faveolata] | Q9U489 Protein lin-41 OS=Caenorhabditis elegans OX=6239 GN=lin-41 P | JBrowse |
| Astrangia poculata | evm.model.Ap12.2607 | XP_020602060.1 | E3 ubiquitin-protein ligase TRIM71-like [Orbicella faveolata] | Q9U489 Protein lin-41 OS=Caenorhabditis elegans OX=6239 GN=lin-41 P | JBrowse |
