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Support counts the member genes carrying the term. % of genes is that count over all 2,575 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00010 | HLH — Helix-loop-helix DNA-binding domain | 2335 / 2,575 | 90.7% | 99.9% of 2,337 | ≥80% support |
| GO | GO:0046983 Molecular Function | protein dimerization activity | 2337 / 2,575 | 90.8% | 100.0% of 2,338 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 2321 / 2,575 | 90.1% | 99.3% of 2,338 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 2156 / 2,575 | 83.7% | 92.2% of 2,338 | ≥80% support |
| PANTHER | PTHR23349 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST | 1851 / 2,575 | 71.9% | 79.7% of 2,324 | ≥50% support |
| GO | GO:0000977 Molecular Function | RNA polymerase II transcription regulatory region sequence-specific DNA binding | 1851 / 2,575 | 71.9% | 79.2% of 2,338 | ≥50% support |
| GO | GO:0032502 Biological Process | developmental process | 1851 / 2,575 | 71.9% | 79.2% of 2,338 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Astrangia poculata | evm.model.Ap14.79 | XP_020617680.1 | T-cell acute lymphocytic leukemia protein 1-like [Orbicella faveolata] | P27792 Protein lyl-1 OS=Mus musculus OX=10090 GN=Lyl1 PE=2 SV=2 | JBrowse |
| Astrangia poculata | evm.model.Ap14.80 | XP_020617719.1 | T-cell acute lymphocytic leukemia protein 1-like [Orbicella faveolata] | Q90YI8 T-cell acute lymphocytic leukemia protein 1 OS=Takifugu rubr | JBrowse |
| Astrangia poculata | evm.model.Ap14.81 | XP_020617720.1 | T-cell acute lymphocytic leukemia protein 1 homolog [Orbicella faveolata] | Q90YI8 T-cell acute lymphocytic leukemia protein 1 OS=Takifugu rubr | JBrowse |
| Astrangia poculata | evm.model.Ap2.2188 | XP_020629353.1 | helix-loop-helix protein 2-like [Orbicella faveolata] | Q90259 Achaete-scute homolog 1a OS=Danio rerio OX=7955 GN=ascl1a PE | JBrowse |
| Astrangia poculata | evm.model.Ap2.2195 | KAJ7330198.1 | hypothetical protein OS493_022719 [Desmophyllum pertusum] | Q06234 Achaete-scute homolog 1 OS=Xenopus laevis OX=8355 GN=ascl1 P | JBrowse |
| Astrangia poculata | evm.model.Ap2.2197 | XP_020629340.1 | achaete-scute homolog 5-like [Orbicella faveolata] | M0QWB7 Achaete-scute homolog 5 OS=Mus musculus OX=10090 GN=Ascl5 PE | JBrowse |
| Astrangia poculata | evm.model.Ap2.2198 | KAJ7330201.1 | Achaete-scute bHLH transcription factor [Desmophyllum pertusum] | Q90259 Achaete-scute homolog 1a OS=Danio rerio OX=7955 GN=ascl1a PE | JBrowse |
| Astrangia poculata | evm.model.Ap5.552 | XP_020629888.1 | heart- and neural crest derivatives-expressed protein 2-like [Orbicella faveolata] | P57102 Heart- and neural crest derivatives-expressed protein 2 OS=D | JBrowse |
| Astrangia poculata | evm.model.Ap5.553 | XP_020629881.1 | heart- and neural crest derivatives-expressed protein 2-like [Orbicella faveolata] | Q90690 Heart- and neural crest derivatives-expressed protein 2 OS=G | JBrowse |
| Astrangia poculata | evm.model.Ap7.1198 | XP_020619260.1 | pancreas transcription factor 1 subunit alpha-like [Orbicella faveolata] | Q7ZSX3 Pancreas transcription factor 1 subunit alpha OS=Danio rerio | JBrowse |
| Astrangia poculata | evm.model.Ap7.1203 | KAJ7365169.1 | hypothetical protein OS493_007820 [Desmophyllum pertusum] | P97309 Mesoderm posterior protein 1 OS=Mus musculus OX=10090 GN=Mes | JBrowse |
| Astrangia poculata | evm.model.Ap9.2506 | XP_020622947.1 | protein atonal homolog 8-like [Orbicella faveolata] | Q96SQ7 Transcription factor ATOH8 OS=Homo sapiens OX=9606 GN=ATOH8 | JBrowse |
