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This orthogroup contains 2,335 genes from 149 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 2,335 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11937 | ACTIN | 2071 / 2,335 | 88.7% | 99.4% of 2,084 | ≥80% support |
| Pfam | PF00022 | Actin | 2092 / 2,335 | 89.6% | 100.0% of 2,093 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Astrangia poculata | evm.model.Ap10.1927 | XP_020600429.1 | actin, cytoplasmic [Orbicella faveolata] | P12716 Actin, cytoplasmic OS=Pisaster ochraceus OX=7612 PE=3 SV=1 | JBrowse |
| Astrangia poculata | evm.model.Ap11.944 | XP_020623214.1 | MATH and LRR domain-containing protein PFE0570w-like [Orbicella faveolata] | P30173 Actin-101 OS=Solanum tuberosum OX=4113 GN=AC101 PE=3 SV=1 | JBrowse |
| Astrangia poculata | evm.model.Ap12.1197 | XP_015753792.1 | PREDICTED: actin-3 [Acropora digitifera] | P41340 Actin-3 OS=Limulus polyphemus OX=6850 PE=1 SV=1 | JBrowse |
| Astrangia poculata | evm.model.Ap12.1198 | BAC44866.1 | actin [Galaxea fascicularis] | P12716 Actin, cytoplasmic OS=Pisaster ochraceus OX=7612 PE=3 SV=1 | JBrowse |
| Astrangia poculata | evm.model.Ap12.843 | XP_045158456.1 | actin, cytoplasmic [Mercenaria mercenaria] | P12716 Actin, cytoplasmic OS=Pisaster ochraceus OX=7612 PE=3 SV=1 | JBrowse |
| Astrangia poculata | evm.model.Ap12.844 | AGR44479.1 | actin 1, partial [Echinaster sepositus] | P10994 Actin, alpha skeletal muscle (Fragment) OS=Pleurodeles waltl | JBrowse |
| Astrangia poculata | evm.model.Ap12.845 | CAD7665483.1 | unnamed protein product [Oppiella nova] | P41112 Actin-1/2 OS=Podocoryna carnea OX=6096 GN=ACTIA PE=2 SV=1 | JBrowse |
| Astrangia poculata | evm.model.Ap12.847 | XP_020600465.1 | actin, cytoplasmic-like [Orbicella faveolata] | P12716 Actin, cytoplasmic OS=Pisaster ochraceus OX=7612 PE=3 SV=1 | JBrowse |
| Astrangia poculata | evm.model.Ap12.848 | XP_020627983.1 | actin-like [Orbicella faveolata] | P12716 Actin, cytoplasmic OS=Pisaster ochraceus OX=7612 PE=3 SV=1 | JBrowse |
| Astrangia poculata | evm.model.Ap12.851 | XP_020627983.1 | actin-like [Orbicella faveolata] | Q93131 Actin, cytoplasmic OS=Branchiostoma floridae OX=7739 PE=2 SV | JBrowse |
| Astrangia poculata | evm.model.Ap12.866 | KAJ7352908.1 | ATP binding [Desmophyllum pertusum] | P53472 Actin, cytoskeletal 1A OS=Strongylocentrotus purpuratus OX=7 | JBrowse |
| Astrangia poculata | evm.model.Ap12.869 | XP_048576268.1 | actin, non-muscle 6.2 [Nematostella vectensis] | P17126 Actin, non-muscle 6.2 OS=Hydra vulgaris OX=6087 PE=3 SV=1 | JBrowse |
| Astrangia poculata | evm.model.Ap12.871 | XP_020600429.1 | actin, cytoplasmic [Orbicella faveolata] | P12716 Actin, cytoplasmic OS=Pisaster ochraceus OX=7612 PE=3 SV=1 | JBrowse |
| Astrangia poculata | evm.model.Ap12.872 | XP_045158456.1 | actin, cytoplasmic [Mercenaria mercenaria] | P12716 Actin, cytoplasmic OS=Pisaster ochraceus OX=7612 PE=3 SV=1 | JBrowse |
| Astrangia poculata | evm.model.Ap12.892 | PFX22595.1 | Actin, cytoplasmic [Stylophora pistillata] | P12716 Actin, cytoplasmic OS=Pisaster ochraceus OX=7612 PE=3 SV=1 | JBrowse |
| Astrangia poculata | evm.model.Ap13.13 | CAH3040618.1 | unnamed protein product [Porites lobata] | Q7ZXV3 Actin-related protein 2-B OS=Xenopus laevis OX=8355 GN=actr2 | JBrowse |
| Astrangia poculata | evm.model.Ap2.1892 | KAJ7392520.1 | Alpha-centractin [Desmophyllum pertusum] | P61162 Alpha-centractin OS=Canis lupus familiaris OX=9615 GN=ACTR1A | JBrowse |
| Astrangia poculata | evm.model.Ap4.406 | XP_020605001.1 | uncharacterized protein LOC110043844 [Orbicella faveolata] | P53461 Actin, nonmuscle OS=Halocynthia roretzi OX=7729 GN=CA1 PE=3 | JBrowse |
| Astrangia poculata | evm.model.Ap4.6356 | CAH3040618.1 | unnamed protein product [Porites lobata] | Q7SXW6 Actin-related protein 2-A OS=Danio rerio OX=7955 GN=actr2a P | JBrowse |
| Astrangia poculata | evm.model.Ap6.2424 | BAC44866.1 | actin [Galaxea fascicularis] | Q964E2 Actin, cytoplasmic OS=Biomphalaria pfeifferi OX=112525 PE=3 | JBrowse |
