In this module, the detailed information of all genes in this specific family was shown as follows.
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Astrangia poculata | evm.model.Ap1.2364 | KAH1026924.1 | hypothetical protein HUJ05_000514 [Dendroctonus ponderosae] | Q91VN0 Low-density lipoprotein receptor-related protein 5 OS=Mus mu | JBrowse |
| Astrangia poculata | evm.model.Ap1.2367 | PFX30401.1 | Low-density lipoprotein receptor-related protein 4 [Stylophora pistillata] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Astrangia poculata | evm.model.Ap1.2374 | XP_015757898.1 | PREDICTED: uncharacterized protein LOC107337284 [Acropora digitifera] | O88572 Low-density lipoprotein receptor-related protein 6 OS=Mus mu | JBrowse |
| Astrangia poculata | evm.model.Ap1.3570 | XP_020602330.1 | uncharacterized protein LOC110041394 [Orbicella faveolata] | – | JBrowse |
| Astrangia poculata | evm.model.Ap1.3571 | KAH9496206.1 | Low-density lipoprotein receptor- protein 4, partial [Bulinus truncatus] | Q8VI56 Low-density lipoprotein receptor-related protein 4 OS=Mus mu | JBrowse |
| Astrangia poculata | evm.model.Ap1.3579 | KAJ7360376.1 | Low-density lipoprotein receptor- protein 4 [Desmophyllum pertusum] | O88572 Low-density lipoprotein receptor-related protein 6 OS=Mus mu | JBrowse |
| Astrangia poculata | evm.model.Ap1.3580 | CAH3155962.1 | unnamed protein product, partial [Porites lobata] | Q8VI56 Low-density lipoprotein receptor-related protein 4 OS=Mus mu | JBrowse |
| Astrangia poculata | evm.model.Ap1.3581 | KAJ7360371.1 | Low-density lipoprotein receptor- protein 4 [Desmophyllum pertusum] | Q8VI56 Low-density lipoprotein receptor-related protein 4 OS=Mus mu | JBrowse |
| Astrangia poculata | evm.model.Ap10.1707 | XP_052818471.1 | low-density lipoprotein receptor-related protein 2-like [Mya arenaria] | Q04833 Low-density lipoprotein receptor-related protein OS=Caenorha | JBrowse |
| Astrangia poculata | evm.model.Ap10.1716 | BAN20688.1 | low-density lipoprotein receptor [Riptortus pedestris] | A2ARV4 Low-density lipoprotein receptor-related protein 2 OS=Mus mu | JBrowse |
| Astrangia poculata | evm.model.Ap11.504 | NXK74693.1 | LRP1 protein [Amazona guildingii] | P98158 Low-density lipoprotein receptor-related protein 2 OS=Rattus | JBrowse |
| Astrangia poculata | evm.model.Ap13.610 | XP_044165691.1 | low-density lipoprotein receptor-related protein 4-like isoform X3 [Acropora millepora] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Astrangia poculata | evm.model.Ap14.237 | XP_029198187.2 | very low-density lipoprotein receptor-like isoform X2 [Acropora millepora] | P98158 Low-density lipoprotein receptor-related protein 2 OS=Rattus | JBrowse |
| Astrangia poculata | evm.model.Ap14.249 | XP_031564897.1 | very low-density lipoprotein receptor-like isoform X5 [Actinia tenebrosa] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Astrangia poculata | evm.model.Ap14.252 | XP_031564893.1 | very low-density lipoprotein receptor-like isoform X2 [Actinia tenebrosa] | Q07954 Prolow-density lipoprotein receptor-related protein 1 OS=Hom | JBrowse |
| Astrangia poculata | evm.model.Ap14.254 | XP_031564895.1 | very low-density lipoprotein receptor-like isoform X3 [Actinia tenebrosa] | Q28832 Low-density lipoprotein receptor (Fragment) OS=Sus scrofa OX | JBrowse |
| Astrangia poculata | evm.model.Ap14.85 | XP_047738867.1 | low-density lipoprotein receptor, partial [Hyalella azteca] | G3V928 Prolow-density lipoprotein receptor-related protein 1 OS=Rat | JBrowse |
| Astrangia poculata | evm.model.Ap2.3207 | XP_031564893.1 | very low-density lipoprotein receptor-like isoform X2 [Actinia tenebrosa] | P98157 Low-density lipoprotein receptor-related protein 1 OS=Gallus | JBrowse |
