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This orthogroup contains 1,179 genes from 113 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 1,179 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00092 | VWA — von Willebrand factor type A domain | 1079 / 1,179 | 91.5% | 100.0% of 1,079 | ≥80% support |
| PANTHER | PTHR24020 | COLLAGEN ALPHA | 824 / 1,179 | 69.9% | 82.0% of 1,005 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Astrangia poculata | evm.model.Ap2.2376 | XP_020616584.1 | cochlin-like [Orbicella faveolata] | – | JBrowse |
| Astrangia poculata | evm.model.Ap2.2377 | XP_027049859.1 | collagen alpha-1(XIV) chain-like [Pocillopora damicornis] | Q9QXH4 Integrin alpha-X OS=Mus musculus OX=10090 GN=Itgax PE=1 SV=1 | JBrowse |
| Astrangia poculata | evm.model.Ap2.2377.1.5f15e14e | XP_027049859.1 | collagen alpha-1(XIV) chain-like [Pocillopora damicornis] | Q9QXH4 Integrin alpha-X OS=Mus musculus OX=10090 GN=Itgax PE=1 SV=1 | JBrowse |
| Astrangia poculata | evm.model.Ap2.2387 | XP_020616584.1 | cochlin-like [Orbicella faveolata] | Q9QXH4 Integrin alpha-X OS=Mus musculus OX=10090 GN=Itgax PE=1 SV=1 | JBrowse |
| Astrangia poculata | evm.model.Ap2.2388 | XP_020616584.1 | cochlin-like [Orbicella faveolata] | Q9QXH4 Integrin alpha-X OS=Mus musculus OX=10090 GN=Itgax PE=1 SV=1 | JBrowse |
| Astrangia poculata | evm.model.Ap2.2390 | XP_020616584.1 | cochlin-like [Orbicella faveolata] | A6H584 Collagen alpha-5(VI) chain OS=Mus musculus OX=10090 GN=Col6a | JBrowse |
| Astrangia poculata | evm.model.Ap2.2393 | XP_020616619.1 | uncharacterized protein LOC110054609 [Orbicella faveolata] | – | JBrowse |
| Astrangia poculata | evm.model.Ap2.2394 | XP_020616584.1 | cochlin-like [Orbicella faveolata] | – | JBrowse |
| Astrangia poculata | evm.model.Ap2.2395 | XP_020616584.1 | cochlin-like [Orbicella faveolata] | Q63870 Collagen alpha-1(VII) chain OS=Mus musculus OX=10090 GN=Col7 | JBrowse |
| Astrangia poculata | evm.model.Ap2.2396 | XP_020616584.1 | cochlin-like [Orbicella faveolata] | P32018 Collagen alpha-1(XIV) chain OS=Gallus gallus OX=9031 GN=COL1 | JBrowse |
| Astrangia poculata | evm.model.Ap2.2444 | XP_020629377.1 | collagen alpha-1(XII) chain-like [Orbicella faveolata] | Q8NFW1 Collagen alpha-1(XXII) chain OS=Homo sapiens OX=9606 GN=COL2 | JBrowse |
| Astrangia poculata | evm.model.Ap2.2445 | XP_020629376.1 | collagen alpha-1(VI) chain-like [Orbicella faveolata] | Q8NFW1 Collagen alpha-1(XXII) chain OS=Homo sapiens OX=9606 GN=COL2 | JBrowse |
| Astrangia poculata | evm.model.Ap3.2374 | XP_020613564.1 | collagen alpha-1(XII) chain-like [Orbicella faveolata] | – | JBrowse |
