In this module, the detailed information of all genes in this specific family was shown as follows.
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Astrangia poculata | evm.model.Ap1.749 | XP_029208280.2 | glycine-rich cell wall structural protein 1.8-like [Acropora millepora] | P0C6B8 Sushi, von Willebrand factor type A, EGF and pentraxin domai | JBrowse |
| Astrangia poculata | evm.model.Ap2.1872 | CAH3141320.1 | unnamed protein product, partial [Pocillopora meandrina] | P04323 Retrovirus-related Pol polyprotein from transposon 17.6 OS=D | JBrowse |
| Astrangia poculata | evm.model.Ap2.1877 | CAH3168521.1 | unnamed protein product [Pocillopora meandrina] | – | JBrowse |
| Astrangia poculata | evm.model.Ap9.1716 | XP_027056963.1 | glycine-rich cell wall structural protein 1.8-like, partial [Pocillopora damicornis] | – | JBrowse |
| Astrangia poculata | evm.model.Ap9.952 | XP_020628506.1 | peroxidasin homolog [Orbicella faveolata] | Q96RW7 Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2 | JBrowse |
| Astrangia poculata | evm.model.Ap9.957 | XP_020628503.1 | collagen alpha-1(I) chain-like [Orbicella faveolata] | Q9Y6N7 Roundabout homolog 1 OS=Homo sapiens OX=9606 GN=ROBO1 PE=1 S | JBrowse |
| Astrangia poculata | evm.model.Ap9.958 | CAH3174042.1 | unnamed protein product [Porites evermanni] | Q7TPD3 Roundabout homolog 2 OS=Mus musculus OX=10090 GN=Robo2 PE=1 | JBrowse |
| Astrangia poculata | evm.model.Ap9.964 | CAH3168529.1 | unnamed protein product, partial [Pocillopora meandrina] | Q9UQ52 Contactin-6 OS=Homo sapiens OX=9606 GN=CNTN6 PE=1 SV=1 | JBrowse |
| Astrangia poculata | evm.model.Ap9.969 | XP_020628508.1 | peroxidasin homolog, partial [Orbicella faveolata] | Q05793 Basement membrane-specific heparan sulfate proteoglycan core | JBrowse |
| Astrangia poculata | evm.model.Ap9.972 | XP_015774706.1 | PREDICTED: hemicentin-2-like [Acropora digitifera] | G5EBF1 Protein sax-3 OS=Caenorhabditis elegans OX=6239 GN=sax-3 PE= | JBrowse |
| Astrangia poculata | evm.model.Ap9.978 | KAJ7383088.1 | hypothetical protein OS493_030975 [Desmophyllum pertusum] | Q96RW7 Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2 | JBrowse |
