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This orthogroup contains 767 genes from 143 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 767 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00096 | zf-C2H2 — Zinc finger, C2H2 type | 654 / 767 | 85.3% | 98.6% of 663 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 669 / 767 | 87.2% | 99.9% of 670 | ≥80% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 668 / 767 | 87.1% | 99.7% of 670 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 668 / 767 | 87.1% | 99.7% of 670 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 667 / 767 | 87.0% | 99.6% of 670 | ≥80% support |
| PANTHER | PTHR19818 | ZINC FINGER PROTEIN ZIC AND GLI | 391 / 767 | 51.0% | 58.4% of 670 | ≥50% support |
| Pfam | PF18366 | zf_ZIC — Zic proteins zinc finger domain | 493 / 767 | 64.3% | 74.4% of 663 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Astrangia poculata | evm.model.Ap12.1993 | KAJ7373516.1 | hypothetical protein OS493_011115 [Desmophyllum pertusum] | Q9IB89 Zinc finger protein ZIC 5 OS=Xenopus laevis OX=8355 GN=zic5 | JBrowse |
| Astrangia poculata | evm.model.Ap12.1998 | XP_020603910.1 | zinc finger protein ZIC 4-like [Orbicella faveolata] | Q9IB89 Zinc finger protein ZIC 5 OS=Xenopus laevis OX=8355 GN=zic5 | JBrowse |
| Astrangia poculata | evm.model.Ap12.2001 | KAJ7373505.1 | hypothetical protein OS493_011102 [Desmophyllum pertusum] | Q9IB89 Zinc finger protein ZIC 5 OS=Xenopus laevis OX=8355 GN=zic5 | JBrowse |
| Astrangia poculata | evm.model.Ap12.2004 | XP_020603911.1 | zinc finger protein ZIC 1-like [Orbicella faveolata] | Q9IB89 Zinc finger protein ZIC 5 OS=Xenopus laevis OX=8355 GN=zic5 | JBrowse |
| Astrangia poculata | evm.model.Ap8.239 | KAJ7392676.1 | hypothetical protein OS493_010327 [Desmophyllum pertusum] | Q9IB89 Zinc finger protein ZIC 5 OS=Xenopus laevis OX=8355 GN=zic5 | JBrowse |
