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This orthogroup contains 395 genes from 138 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 395 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12375 | RNA-BINDING PROTEIN LUC7-RELATED | 350 / 395 | 88.6% | 100.0% of 350 | ≥80% support |
| Pfam | PF03194 | LUC7 | 348 / 395 | 88.1% | 100.0% of 348 | ≥80% support |
| GO | GO:0003729 Molecular Function | mRNA binding | 350 / 395 | 88.6% | 100.0% of 350 | ≥80% support |
| GO | GO:0005685 Cellular Component | U1 snRNP | 350 / 395 | 88.6% | 100.0% of 350 | ≥80% support |
| GO | GO:0006376 Biological Process | mRNA splice site recognition | 350 / 395 | 88.6% | 100.0% of 350 | ≥80% support |
| GO | GO:0071004 Cellular Component | U2-type prespliceosome | 350 / 395 | 88.6% | 100.0% of 350 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Astrangia poculata | evm.model.Ap12.1303 | XP_027053740.1 | putative RNA-binding protein Luc7-like 2 isoform X1 [Pocillopora damicornis] | Q9Y383 Putative RNA-binding protein Luc7-like 2 OS=Homo sapiens OX= | JBrowse |
