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This orthogroup contains 314 genes from 145 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 314 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12691 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 23 | 268 / 314 | 85.4% | 100.0% of 268 | ≥80% support |
| Pfam | PF11573 | Med23 — Mediator complex subunit 23 | 274 / 314 | 87.3% | 100.0% of 274 | ≥80% support |
| GO | GO:0005667 Cellular Component | transcription regulator complex | 268 / 314 | 85.4% | 100.0% of 268 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 268 / 314 | 85.4% | 100.0% of 268 | ≥80% support |
| GO | GO:0010628 Biological Process | positive regulation of gene expression | 268 / 314 | 85.4% | 100.0% of 268 | ≥80% support |
| GO | GO:0016592 Cellular Component | mediator complex | 268 / 314 | 85.4% | 100.0% of 268 | ≥80% support |
| KEGG | K15166 | MED23 — Transcription machinery | 162 / 314 | 51.6% | 98.8% of 164 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Astrangia poculata | evm.model.Ap3.1385 | XP_020607571.1 | mediator of RNA polymerase II transcription subunit 23-like [Orbicella faveolata] | Q6P423 Mediator of RNA polymerase II transcription subunit 23 OS=Xe | JBrowse |
