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This orthogroup contains 283 genes from 131 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 283 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR24020 | COLLAGEN ALPHA | 188 / 283 | 66.4% | 74.0% of 254 | ≥50% support |
| Pfam | PF00092 | VWA — von Willebrand factor type A domain | 226 / 283 | 79.9% | 88.6% of 255 | ≥50% support |
| Pfam | PF00090 | TSP_1 — Thrombospondin type 1 domain | 204 / 283 | 72.1% | 80.0% of 255 | ≥50% support |
| Pfam | PF00754 | F5_F8_type_C — F5/8 type C domain | 198 / 283 | 70.0% | 77.7% of 255 | ≥50% support |
| GO | GO:0062023 Cellular Component | collagen-containing extracellular matrix | 164 / 283 | 58.0% | 98.2% of 167 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Astrangia poculata | evm.model.Ap8.1673 | XP_020629421.1 | coadhesin-like isoform X1 [Orbicella faveolata] | Q99715 Collagen alpha-1(XII) chain OS=Homo sapiens OX=9606 GN=COL12 | JBrowse |
