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This orthogroup contains 246 genes from 138 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 246 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR13520 | RAD50-INTERACTING PROTEIN 1 RINT-1 | 197 / 246 | 80.1% | 98.5% of 200 | ≥80% support |
| GO | GO:0006890 Biological Process | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | 199 / 246 | 80.9% | 99.0% of 201 | ≥80% support |
| GO | GO:0006888 Biological Process | endoplasmic reticulum to Golgi vesicle-mediated transport | 198 / 246 | 80.5% | 98.5% of 201 | ≥80% support |
| GO | GO:0070939 Cellular Component | Dsl1/NZR complex | 198 / 246 | 80.5% | 98.5% of 201 | ≥80% support |
| GO | GO:0060628 Biological Process | regulation of ER to Golgi vesicle-mediated transport | 197 / 246 | 80.1% | 98.0% of 201 | ≥80% support |
| Pfam | PF04437 | RINT1_TIP1 — RINT-1/TIP-1 family | 194 / 246 | 78.9% | 98.5% of 197 | ≥50% support |
| KEGG | K20474 | RINT1, TIP20 — Membrane trafficking | 144 / 246 | 58.5% | 98.0% of 147 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Astrangia poculata | evm.model.Ap12.1548 | RMX38416.1 | hypothetical protein pdam_00011819 [Pocillopora damicornis] | Q6NUQ1 RAD50-interacting protein 1 OS=Homo sapiens OX=9606 GN=RINT1 | JBrowse |
