← Back to the gene family browser
Support counts the member genes carrying the term. % of genes is that count over all 174 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00008 | EGF | 156 / 174 | 89.7% | 98.7% of 158 | ≥80% support |
| Pfam | PF07645 | EGF_CA — Calcium-binding EGF domain | 145 / 174 | 83.3% | 91.8% of 158 | ≥80% support |
| GO | GO:0005509 Molecular Function | calcium ion binding | 155 / 174 | 89.1% | 100.0% of 155 | ≥80% support |
| Pfam | PF02210 | Laminin_G_2 — Laminin G domain | 138 / 174 | 79.3% | 87.3% of 158 | ≥50% support |
| Pfam | PF12661 | hEGF — Human growth factor-like EGF | 105 / 174 | 60.3% | 66.5% of 158 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Astrangia poculata | evm.model.Ap1.2731 | XP_020618976.1 | neurogenic locus notch homolog protein 2-like isoform X1 [Orbicella faveolata] | P82279 Protein crumbs homolog 1 OS=Homo sapiens OX=9606 GN=CRB1 PE= | JBrowse |
| Astrangia poculata | evm.model.Ap1.2732 | XP_020618976.1 | neurogenic locus notch homolog protein 2-like isoform X1 [Orbicella faveolata] | P24043 Laminin subunit alpha-2 OS=Homo sapiens OX=9606 GN=LAMA2 PE= | JBrowse |
