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This orthogroup contains 114 genes from 92 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 114 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR23341 | HIGH MOBILITY GROUP PROTEINS HMG-A AND C | 96 / 114 | 84.2% | 100.0% of 96 | ≥80% support |
| Pfam | PF02178 | AT_hook — AT hook motif | 104 / 114 | 91.2% | 100.0% of 104 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 109 / 114 | 95.6% | 100.0% of 109 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 108 / 114 | 94.7% | 99.1% of 109 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 106 / 114 | 93.0% | 97.3% of 109 | ≥80% support |
| GO | GO:0000785 Cellular Component | chromatin | 103 / 114 | 90.4% | 94.5% of 109 | ≥80% support |
| GO | GO:0003712 Molecular Function | transcription coregulator activity | 96 / 114 | 84.2% | 88.1% of 109 | ≥80% support |
| KEGG | K09283 | HMGA2 — Chromosome and associated proteins | 60 / 114 | 52.6% | 100.0% of 60 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Genome browser |
|---|---|---|---|---|
| Astrangia poculata | evm.model.Ap10.232 | XP_020629714.1 | origin recognition complex subunit 4-like [Orbicella faveolata] | JBrowse |
