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This orthogroup contains 2,252 genes from 149 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 2,252 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00046 | Homeodomain | 1928 / 2,252 | 85.6% | 97.9% of 1,970 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 1977 / 2,252 | 87.8% | 99.8% of 1,982 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 1923 / 2,252 | 85.4% | 97.0% of 1,982 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 1851 / 2,252 | 82.2% | 93.4% of 1,982 | ≥80% support |
| PANTHER | PTHR24329 | HOMEOBOX PROTEIN ARISTALESS | 1394 / 2,252 | 61.9% | 71.5% of 1,951 | ≥50% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 1765 / 2,252 | 78.4% | 89.1% of 1,982 | ≥50% support |
| GO | GO:0000977 Molecular Function | RNA polymerase II transcription regulatory region sequence-specific DNA binding | 1404 / 2,252 | 62.3% | 70.8% of 1,982 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Candelabrum cocksii | ENSQNNP00000000957.1 | KAJ8037621.1 | Homeobox protein unc-4 [Holothuria leucospilota] | O08934 Homeobox protein unc-4 homolog OS=Mus musculus OX=10090 GN=U | JBrowse |
| Candelabrum cocksii | ENSQNNP00000001045.1 | XP_012557153.2 | diencephalon/mesencephalon homeobox protein 1-A isoform X2 [Hydra vulgaris] | A6NNA5 Dorsal root ganglia homeobox protein OS=Homo sapiens OX=9606 | JBrowse |
| Candelabrum cocksii | ENSQNNP00000001050.1 | XP_012557153.2 | diencephalon/mesencephalon homeobox protein 1-A isoform X2 [Hydra vulgaris] | A6NNA5 Dorsal root ganglia homeobox protein OS=Homo sapiens OX=9606 | JBrowse |
| Candelabrum cocksii | ENSQNNP00000001054.1 | XP_012557153.2 | diencephalon/mesencephalon homeobox protein 1-A isoform X2 [Hydra vulgaris] | A6NNA5 Dorsal root ganglia homeobox protein OS=Homo sapiens OX=9606 | JBrowse |
| Candelabrum cocksii | ENSQNNP00000008994.1 | VDO92150.1 | unnamed protein product [Soboliphyme baturini] | P54366 Homeobox protein goosecoid OS=Drosophila melanogaster OX=722 | JBrowse |
| Candelabrum cocksii | ENSQNNP00000009003.1 | VDO92150.1 | unnamed protein product [Soboliphyme baturini] | P54366 Homeobox protein goosecoid OS=Drosophila melanogaster OX=722 | JBrowse |
| Candelabrum cocksii | ENSQNNP00000009800.1 | XP_004208605.2 | visual system homeobox 2-like [Hydra vulgaris] | P41935 Homeobox protein ceh-10 OS=Caenorhabditis elegans OX=6239 GN | JBrowse |
| Candelabrum cocksii | ENSQNNP00000012900.1 | CEG06170.1 | homeobox transcription factor Orthopedia, partial [Aurelia aurita] | Q7YTC2 Homeobox protein orthopedia OS=Saccoglossus kowalevskii OX=1 | JBrowse |
| Candelabrum cocksii | ENSQNNP00000013771.1 | XP_002168027.1 | aristaless-related homeobox protein [Hydra vulgaris] | Q06453 Homeobox protein aristaless OS=Drosophila melanogaster OX=72 | JBrowse |
| Candelabrum cocksii | ENSQNNP00000013783.1 | KAG4073286.1 | hypothetical protein HA402_008632 [Bradysia odoriphaga] | Q26657 Aristaless homeobox protein (Fragment) OS=Strongylocentrotus | JBrowse |
| Candelabrum cocksii | ENSQNNP00000014079.1 | XP_043469218.1 | paired mesoderm homeobox protein 2-like isoform X2 [Leptopilina heterotoma] | Q26657 Aristaless homeobox protein (Fragment) OS=Strongylocentrotus | JBrowse |
| Candelabrum cocksii | ENSQNNP00000017440.1 | ALJ33542.1 | Rx [Clytia hemisphaerica] | Q96QS3 Homeobox protein ARX OS=Homo sapiens OX=9606 GN=ARX PE=1 SV= | JBrowse |
| Candelabrum cocksii | ENSQNNP00000017445.1 | XP_045460129.1 | retinal homeobox protein Rx1-like isoform X1 [Harmonia axyridis] | Q96QS3 Homeobox protein ARX OS=Homo sapiens OX=9606 GN=ARX PE=1 SV= | JBrowse |
| Candelabrum cocksii | ENSQNNP00000017453.1 | CAH0550718.1 | unnamed protein product [Brassicogethes aeneus] | Q96QS3 Homeobox protein ARX OS=Homo sapiens OX=9606 GN=ARX PE=1 SV= | JBrowse |
| Candelabrum cocksii | ENSQNNP00000019749.1 | CEG06177.1 | DRGX homeobox transcription factor, partial [Clytia hemisphaerica] | A6NNA5 Dorsal root ganglia homeobox protein OS=Homo sapiens OX=9606 | JBrowse |
| Candelabrum cocksii | ENSQNNP00000022549.1 | XP_047127024.1 | aristaless homeobox protein isoform X2 [Hydra vulgaris] | Q26657 Aristaless homeobox protein (Fragment) OS=Strongylocentrotus | JBrowse |
| Candelabrum cocksii | ENSQNNP00000022556.1 | XP_047127024.1 | aristaless homeobox protein isoform X2 [Hydra vulgaris] | Q26657 Aristaless homeobox protein (Fragment) OS=Strongylocentrotus | JBrowse |
| Candelabrum cocksii | ENSQNNP00000022563.1 | XP_002160848.1 | homeobox protein aristaless isoform X3 [Hydra vulgaris] | Q26657 Aristaless homeobox protein (Fragment) OS=Strongylocentrotus | JBrowse |
| Candelabrum cocksii | ENSQNNP00000026707.1 | XP_012566844.1 | short stature homeobox protein [Hydra vulgaris] | O35750 Short stature homeobox protein 2 (Fragment) OS=Rattus norveg | JBrowse |
| Candelabrum cocksii | ENSQNNP00000026713.1 | XP_012566844.1 | short stature homeobox protein [Hydra vulgaris] | O35750 Short stature homeobox protein 2 (Fragment) OS=Rattus norveg | JBrowse |
