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This orthogroup contains 868 genes from 143 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 868 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 766 / 868 | 88.3% | 100.0% of 766 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 767 / 868 | 88.4% | 100.0% of 767 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 766 / 868 | 88.3% | 99.9% of 767 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Candelabrum cocksii | ENSQNNP00000003813.1 | XP_002153804.2 | RNA-binding protein 3 [Hydra vulgaris] | Q9DED4 Cold-inducible RNA-binding protein B OS=Xenopus laevis OX=83 | JBrowse |
| Candelabrum cocksii | ENSQNNP00000004568.1 | XP_012560932.1 | glycine-rich RNA-binding protein 10 [Hydra vulgaris] | A0A0D1C8Z4 Glycine-rich RNA-binding protein 1 OS=Mycosarcoma maydis OX= | JBrowse |
| Candelabrum cocksii | ENSQNNP00000004579.1 | none | – | JBrowse | |
| Candelabrum cocksii | ENSQNNP00000004584.1 | XP_012560932.1 | glycine-rich RNA-binding protein 10 [Hydra vulgaris] | A0A0D1C8Z4 Glycine-rich RNA-binding protein 1 OS=Mycosarcoma maydis OX= | JBrowse |
| Candelabrum cocksii | ENSQNNP00000008013.1 | AOE14091.1 | RNA-binding protein [uncultured bacterium] | Q9C909 Glycine-rich RNA-binding protein 5, mitochondrial OS=Arabido | JBrowse |
| Candelabrum cocksii | ENSQNNP00000008019.1 | AOE14091.1 | RNA-binding protein [uncultured bacterium] | Q9C909 Glycine-rich RNA-binding protein 5, mitochondrial OS=Arabido | JBrowse |
| Candelabrum cocksii | ENSQNNP00000025249.1 | MCL2932899.1 | RNA-binding protein [Trichodesmium sp. MAG_R03] | Q57014 Putative RNA-binding protein RbpA OS=Synechocystis sp. (stra | JBrowse |
| Candelabrum cocksii | ENSQNNP00000025258.1 | MCL2932899.1 | RNA-binding protein [Trichodesmium sp. MAG_R03] | Q57014 Putative RNA-binding protein RbpA OS=Synechocystis sp. (stra | JBrowse |
