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This orthogroup contains 189 genes from 137 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 189 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR47958 | ATP-DEPENDENT RNA HELICASE DBP3 | 153 / 189 | 81.0% | 88.4% of 173 | ≥80% support |
| Pfam | PF00271 | Helicase_C — Helicase conserved C-terminal domain | 171 / 189 | 90.5% | 98.8% of 173 | ≥80% support |
| Pfam | PF00270 | DEAD | 170 / 189 | 90.0% | 98.3% of 173 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 170 / 189 | 90.0% | 98.3% of 173 | ≥80% support |
| GO | GO:0005524 Molecular Function | ATP binding | 170 / 189 | 90.0% | 98.3% of 173 | ≥80% support |
| GO | GO:0003724 Molecular Function | RNA helicase activity | 168 / 189 | 88.9% | 97.1% of 173 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 152 / 189 | 80.4% | 87.9% of 173 | ≥80% support |
| GO | GO:0000398 Biological Process | mRNA splicing, via spliceosome | 147 / 189 | 77.8% | 85.0% of 173 | ≥50% support |
| GO | GO:0005681 Cellular Component | spliceosomal complex | 147 / 189 | 77.8% | 85.0% of 173 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Candelabrum cocksii | ENSQNNP00000002009.1 | XP_004211504.1 | ATP-dependent RNA helicase abstrakt [Hydra vulgaris] | Q9UJV9 Probable ATP-dependent RNA helicase DDX41 OS=Homo sapiens OX | JBrowse |
| Candelabrum cocksii | ENSQNNP00000002013.1 | XP_004211504.1 | ATP-dependent RNA helicase abstrakt [Hydra vulgaris] | Q54KG1 Probable ATP-dependent RNA helicase ddx41 OS=Dictyostelium d | JBrowse |
| Candelabrum cocksii | ENSQNNP00000002020.1 | XP_004211504.1 | ATP-dependent RNA helicase abstrakt [Hydra vulgaris] | Q9UJV9 Probable ATP-dependent RNA helicase DDX41 OS=Homo sapiens OX | JBrowse |
