← Back to the gene family browser
This orthogroup contains 260 genes from 137 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 260 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR16276 | PENTATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN 3 | 211 / 260 | 81.2% | 98.1% of 215 | ≥80% support |
| GO | GO:0005739 Cellular Component | mitochondrion | 211 / 260 | 81.2% | 95.5% of 221 | ≥80% support |
| GO | GO:0019843 Molecular Function | rRNA binding | 211 / 260 | 81.2% | 95.5% of 221 | ≥80% support |
| GO | GO:0032543 Biological Process | mitochondrial translation | 211 / 260 | 81.2% | 95.5% of 221 | ≥80% support |
| GO | GO:0043024 Molecular Function | ribosomal small subunit binding | 211 / 260 | 81.2% | 95.5% of 221 | ≥80% support |
| GO | GO:0005515 Molecular Function | protein binding | 196 / 260 | 75.4% | 88.7% of 221 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Catalaphyllia jardinei | ENSAVKP00000016700.1 | XP_020619179.1 | pentatricopeptide repeat domain-containing protein 3, mitochondrial-like isoform X3 [Orbicella faveolata] | – | JBrowse |
| Catalaphyllia jardinei | ENSAVKP00000016717.1 | XP_020619178.1 | pentatricopeptide repeat domain-containing protein 3, mitochondrial-like isoform X2 [Orbicella faveolata] | Q14C51 Small ribosomal subunit protein mS39 OS=Mus musculus OX=1009 | JBrowse |
| Catalaphyllia jardinei | ENSAVKP00000016732.1 | XP_020619178.1 | pentatricopeptide repeat domain-containing protein 3, mitochondrial-like isoform X2 [Orbicella faveolata] | Q5R8W8 Small ribosomal subunit protein mS39 OS=Pongo abelii OX=9601 | JBrowse |
| Catalaphyllia jardinei | ENSAVKP00000016747.1 | XP_020619178.1 | pentatricopeptide repeat domain-containing protein 3, mitochondrial-like isoform X2 [Orbicella faveolata] | Q5R8W8 Small ribosomal subunit protein mS39 OS=Pongo abelii OX=9601 | JBrowse |
