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This orthogroup contains 6,131 genes from 149 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 6,131 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00046 | Homeodomain | 5534 / 6,131 | 90.3% | 100.0% of 5,537 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 5541 / 6,131 | 90.4% | 99.9% of 5,546 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 5489 / 6,131 | 89.5% | 99.0% of 5,546 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 5411 / 6,131 | 88.3% | 97.6% of 5,546 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 4181 / 6,131 | 68.2% | 75.4% of 5,546 | ≥50% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 4143 / 6,131 | 67.6% | 74.7% of 5,546 | ≥50% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 3711 / 6,131 | 60.5% | 66.9% of 5,546 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Cyphastrea salae | ENSOFVP00000007725.1 | XP_020602382.1 | homeobox protein ceh-30-like [Orbicella faveolata] | Q9HBU1 Homeobox protein BarH-like 1 OS=Homo sapiens OX=9606 GN=BARX | JBrowse |
| Cyphastrea salae | ENSOFVP00000007732.1 | XP_020602382.1 | homeobox protein ceh-30-like [Orbicella faveolata] | Q9UMQ3 Homeobox protein BarH-like 2 OS=Homo sapiens OX=9606 GN=BARX | JBrowse |
| Cyphastrea salae | ENSOFVP00000013982.1 | RMX46403.1 | hypothetical protein pdam_00000712 [Pocillopora damicornis] | Q9JLZ9 Ventral anterior homeobox 2 OS=Rattus norvegicus OX=10116 GN | JBrowse |
| Cyphastrea salae | ENSOFVP00000014614.1 | XP_020632211.1 | homeobox protein Nkx-3.1-like [Orbicella faveolata] | Q28ET4 Homeobox protein vent1 OS=Xenopus tropicalis OX=8364 GN=vent | JBrowse |
| Cyphastrea salae | ENSOFVP00000015379.1 | XP_020620059.1 | barH-like 2 homeobox protein [Orbicella faveolata] | P63157 BarH-like 1 homeobox protein OS=Mus musculus OX=10090 GN=Bar | JBrowse |
| Cyphastrea salae | ENSOFVP00000015385.1 | XP_020620059.1 | barH-like 2 homeobox protein [Orbicella faveolata] | Q9BZE3 BarH-like 1 homeobox protein OS=Homo sapiens OX=9606 GN=BARH | JBrowse |
| Cyphastrea salae | ENSOFVP00000015989.1 | XP_020614252.1 | ventral anterior homeobox 1-like [Orbicella faveolata] | Q91770 Homeobox protein not2 OS=Xenopus laevis OX=8355 GN=not2 PE=2 | JBrowse |
| Cyphastrea salae | ENSOFVP00000017801.1 | XP_020627880.1 | homeobox protein Nkx-6.1-like [Orbicella faveolata] | Q60554 Homeobox protein Nkx-6.1 OS=Mesocricetus auratus OX=10036 GN | JBrowse |
| Cyphastrea salae | ENSOFVP00000017805.1 | XP_020627880.1 | homeobox protein Nkx-6.1-like [Orbicella faveolata] | Q60554 Homeobox protein Nkx-6.1 OS=Mesocricetus auratus OX=10036 GN | JBrowse |
| Cyphastrea salae | ENSOFVP00000018856.1 | XP_020612724.1 | homeobox protein ceh-30-like [Orbicella faveolata] | Q6GLB9 Homeobox protein EMX1 OS=Xenopus tropicalis OX=8364 GN=emx1 | JBrowse |
| Cyphastrea salae | ENSOFVP00000018938.1 | XP_020620050.1 | barH-like 2 homeobox protein [Orbicella faveolata] | P15858 Homeobox protein H40 (Fragment) OS=Apis mellifera OX=7460 PE | JBrowse |
| Cyphastrea salae | ENSOFVP00000019013.1 | XP_020614324.1 | homeobox protein HMX3-A-like [Orbicella faveolata] | Q0P4W6 Homeobox protein HMX3 OS=Xenopus tropicalis OX=8364 GN=hmx3 | JBrowse |
| Cyphastrea salae | ENSOFVP00000019568.1 | XP_020614363.1 | barH-like 2 homeobox protein isoform X2 [Orbicella faveolata] | P56407 Homeobox protein ceh-9 OS=Caenorhabditis elegans OX=6239 GN= | JBrowse |
| Cyphastrea salae | ENSOFVP00000019625.1 | XP_020614306.1 | NK1 transcription factor-related protein 2-like [Orbicella faveolata] | Q91770 Homeobox protein not2 OS=Xenopus laevis OX=8355 GN=not2 PE=2 | JBrowse |
| Cyphastrea salae | ENSOFVP00000019637.1 | XP_020614306.1 | NK1 transcription factor-related protein 2-like [Orbicella faveolata] | Q91770 Homeobox protein not2 OS=Xenopus laevis OX=8355 GN=not2 PE=2 | JBrowse |
| Cyphastrea salae | ENSOFVP00000019799.1 | XP_020615702.1 | homeobox protein EMX1-like [Orbicella faveolata] | Q04743 Homeobox protein EMX2 OS=Homo sapiens OX=9606 GN=EMX2 PE=1 S | JBrowse |
| Cyphastrea salae | ENSOFVP00000020123.1 | XP_020614353.1 | homeobox protein MSX-2-like isoform X1 [Orbicella faveolata] | Q91770 Homeobox protein not2 OS=Xenopus laevis OX=8355 GN=not2 PE=2 | JBrowse |
| Cyphastrea salae | ENSOFVP00000020261.1 | XP_020616682.1 | homeobox protein Hox-B7-B-like [Orbicella faveolata] | P81192 Homeobox protein Hox-A4 (Fragment) OS=Lineus sanguineus OX=1 | JBrowse |
| Cyphastrea salae | ENSOFVP00000020371.1 | XP_020610052.1 | homeobox protein Hox-D3a-like [Orbicella faveolata] | Q804S6 Homeobox protein EMX1 OS=Danio rerio OX=7955 GN=emx1 PE=2 SV | JBrowse |
| Cyphastrea salae | ENSOFVP00000020516.1 | XP_020614135.1 | homeobox protein slou-like [Orbicella faveolata] | Q75W95 NK1 transcription factor-related protein 1 OS=Danio rerio OX | JBrowse |
