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Support counts the member genes carrying the term. % of genes is that count over all 2,856 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00104 | Hormone_recep — Ligand-binding domain of nuclear hormone receptor | 2479 / 2,856 | 86.8% | 96.0% of 2,583 | ≥80% support |
| Pfam | PF00105 | zf-C4 — Zinc finger, C4 type (two domains) | 2307 / 2,856 | 80.8% | 89.3% of 2,583 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 2355 / 2,856 | 82.5% | 91.5% of 2,574 | ≥80% support |
| GO | GO:0008270 Molecular Function | zinc ion binding | 2330 / 2,856 | 81.6% | 90.5% of 2,574 | ≥80% support |
| GO | GO:0004879 Molecular Function | nuclear receptor activity | 2321 / 2,856 | 81.3% | 90.2% of 2,574 | ≥80% support |
| GO | GO:0003700 Molecular Function | DNA-binding transcription factor activity | 2307 / 2,856 | 80.8% | 89.6% of 2,574 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 2307 / 2,856 | 80.8% | 89.6% of 2,574 | ≥80% support |
| GO | GO:0043565 Molecular Function | sequence-specific DNA binding | 2307 / 2,856 | 80.8% | 89.6% of 2,574 | ≥80% support |
| PANTHER | PTHR24083 | NUCLEAR HORMONE RECEPTOR | 1684 / 2,856 | 59.0% | 65.4% of 2,575 | ≥50% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 1971 / 2,856 | 69.0% | 76.6% of 2,574 | ≥50% support |
| GO | GO:0030154 Biological Process | cell differentiation | 1694 / 2,856 | 59.3% | 65.8% of 2,574 | ≥50% support |
| GO | GO:0048856 Biological Process | anatomical structure development | 1684 / 2,856 | 59.0% | 65.4% of 2,574 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Cyphastrea salae | ENSOFVP00000000271.1 | XP_020624574.1 | hepatocyte nuclear factor 4-gamma-like isoform X4 [Orbicella faveolata] | Q14541 Hepatocyte nuclear factor 4-gamma OS=Homo sapiens OX=9606 GN | JBrowse |
| Cyphastrea salae | ENSOFVP00000000279.1 | XP_020624572.1 | hepatocyte nuclear factor 4-gamma-like isoform X3 [Orbicella faveolata] | Q14541 Hepatocyte nuclear factor 4-gamma OS=Homo sapiens OX=9606 GN | JBrowse |
| Cyphastrea salae | ENSOFVP00000006675.1 | XP_020605231.1 | nuclear receptor subfamily 2 group E member 1-like [Orbicella faveolata] | Q9TTF0 Photoreceptor-specific nuclear receptor OS=Bos taurus OX=991 | JBrowse |
| Cyphastrea salae | ENSOFVP00000006681.1 | XP_020605231.1 | nuclear receptor subfamily 2 group E member 1-like [Orbicella faveolata] | Q9TTF0 Photoreceptor-specific nuclear receptor OS=Bos taurus OX=991 | JBrowse |
| Cyphastrea salae | ENSOFVP00000013711.1 | XP_020632048.1 | photoreceptor-specific nuclear receptor-like [Orbicella faveolata] | Q9Y5X4 Photoreceptor-specific nuclear receptor OS=Homo sapiens OX=9 | JBrowse |
| Cyphastrea salae | ENSOFVP00000015326.1 | XP_020604426.1 | nuclear receptor subfamily 2 group F member 1-A-like isoform X4 [Orbicella faveolata] | Q60632 COUP transcription factor 1 OS=Mus musculus OX=10090 GN=Nr2f | JBrowse |
| Cyphastrea salae | ENSOFVP00000015331.1 | XP_020604422.1 | nuclear receptor subfamily 2 group F member 1-B-like isoform X1 [Orbicella faveolata] | Q60632 COUP transcription factor 1 OS=Mus musculus OX=10090 GN=Nr2f | JBrowse |
| Cyphastrea salae | ENSOFVP00000015337.1 | XP_020604423.1 | nuclear receptor subfamily 2 group F member 1-B-like isoform X2 [Orbicella faveolata] | Q60632 COUP transcription factor 1 OS=Mus musculus OX=10090 GN=Nr2f | JBrowse |
| Cyphastrea salae | ENSOFVP00000015344.1 | KAJ7387659.1 | Nuclear receptor sub 2 group F member 6 [Desmophyllum pertusum] | Q60632 COUP transcription factor 1 OS=Mus musculus OX=10090 GN=Nr2f | JBrowse |
| Cyphastrea salae | ENSOFVP00000016188.1 | AAL29193.1 | nuclear receptor Amtll [Acropora millepora] | P70052 Nuclear receptor subfamily 2 group E member 1 OS=Xenopus lae | JBrowse |
| Cyphastrea salae | ENSOFVP00000017441.1 | XP_020603974.1 | retinoic acid receptor RXR-alpha-B-like [Orbicella faveolata] | Q0GFF6 Retinoic acid receptor RXR-gamma OS=Sus scrofa OX=9823 GN=RX | JBrowse |
| Cyphastrea salae | ENSOFVP00000017961.1 | XP_020621597.1 | nuclear receptor subfamily 2 group F member 1-B-like [Orbicella faveolata] | Q06726 Nuclear receptor subfamily 2 group F member 5 OS=Danio rerio | JBrowse |
| Cyphastrea salae | ENSOFVP00000017970.1 | XP_020621597.1 | nuclear receptor subfamily 2 group F member 1-B-like [Orbicella faveolata] | Q9TTR7 COUP transcription factor 2 OS=Bos taurus OX=9913 GN=NR2F2 P | JBrowse |
| Cyphastrea salae | ENSOFVP00000017976.1 | XP_020621597.1 | nuclear receptor subfamily 2 group F member 1-B-like [Orbicella faveolata] | Q9TTR7 COUP transcription factor 2 OS=Bos taurus OX=9913 GN=NR2F2 P | JBrowse |
| Cyphastrea salae | ENSOFVP00000018450.1 | XP_020626742.1 | retinoic acid receptor RXR-alpha-like [Orbicella faveolata] | P51128 Retinoic acid receptor RXR-alpha OS=Xenopus laevis OX=8355 G | JBrowse |
| Cyphastrea salae | ENSOFVP00000018685.1 | CAH3017704.1 | unnamed protein product, partial [Porites evermanni] | Q06725 Nuclear receptor subfamily 2 group F member 1-A OS=Danio rer | JBrowse |
| Cyphastrea salae | ENSOFVP00000028169.1 | XP_020610809.1 | nuclear receptor subfamily 2 group E member 1-like [Orbicella faveolata] | Q91379 Nuclear receptor subfamily 2 group E member 1 OS=Gallus gall | JBrowse |
| Cyphastrea salae | ENSOFVP00000028250.1 | RMX45985.1 | hypothetical protein pdam_00002062, partial [Pocillopora damicornis] | Q9TTF0 Photoreceptor-specific nuclear receptor OS=Bos taurus OX=991 | JBrowse |
| Cyphastrea salae | ENSOFVP00000034138.1 | XP_020615971.1 | retinoic acid receptor RXR-alpha-like isoform X2 [Orbicella faveolata] | P51128 Retinoic acid receptor RXR-alpha OS=Xenopus laevis OX=8355 G | JBrowse |
| Cyphastrea salae | ENSOFVP00000037816.1 | XP_020604622.1 | nuclear receptor subfamily 2 group C member 1-like [Orbicella faveolata] | Q90733 COUP transcription factor 2 OS=Gallus gallus OX=9031 GN=NR2F | JBrowse |
