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1 sequences in this family share a gene identifier with another member, so the 2,804 sequences above are 2,803 distinct genes — none is counted twice.
Support counts the member genes carrying the term. % of genes is that count over all 2,803 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00028 | Cadherin | 2322 / 2,803 | 82.8% | 97.6% of 2,380 | ≥80% support |
| GO | GO:0005509 Molecular Function | calcium ion binding | 2396 / 2,803 | 85.5% | 98.8% of 2,426 | ≥80% support |
| GO | GO:0016020 Cellular Component | membrane | 2369 / 2,803 | 84.5% | 97.7% of 2,426 | ≥80% support |
| GO | GO:0007156 Biological Process | homophilic cell adhesion via plasma membrane adhesion molecules | 2365 / 2,803 | 84.4% | 97.5% of 2,426 | ≥80% support |
| GO | GO:0007155 Biological Process | cell adhesion | 2247 / 2,803 | 80.2% | 92.6% of 2,426 | ≥80% support |
| GO | GO:0005886 Cellular Component | plasma membrane | 2228 / 2,803 | 79.5% | 91.8% of 2,426 | ≥50% support |
| GO | GO:0098609 Biological Process | cell-cell adhesion | 1660 / 2,803 | 59.2% | 68.4% of 2,426 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Cyphastrea salae | ENSOFVP00000000488.1 | XP_020618778.1 | LOW QUALITY PROTEIN: cadherin-23-like, partial [Orbicella faveolata] | – | JBrowse |
| Cyphastrea salae | ENSOFVP00000001117.1 | XP_020621469.1 | protocadherin Fat 1-like [Orbicella faveolata] | – | JBrowse |
| Cyphastrea salae | ENSOFVP00000003287.1 | XP_020630589.1 | protocadherin-like protein [Orbicella faveolata] | B8V7Q1 Protocadherin-like protein OS=Acropora millepora OX=45264 PE | JBrowse |
| Cyphastrea salae | ENSOFVP00000003749.1 | XP_020621470.1 | cadherin EGF LAG seven-pass G-type receptor 2-like [Orbicella faveolata] | O88277 Protocadherin Fat 2 OS=Rattus norvegicus OX=10116 GN=Fat2 PE | JBrowse |
| Cyphastrea salae | ENSOFVP00000004689.1 | CAH3117639.1 | unnamed protein product [Pocillopora meandrina] | Q6V0I7 Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV= | JBrowse |
| Cyphastrea salae | ENSOFVP00000005414.1 | XP_020606784.1 | cadherin-23-like, partial [Orbicella faveolata] | Q8R508 Protocadherin Fat 3 OS=Rattus norvegicus OX=10116 GN=Fat3 PE | JBrowse |
| Cyphastrea salae | ENSOFVP00000006817.1 | XP_020606784.1 | cadherin-23-like, partial [Orbicella faveolata] | Q2PZL6 Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV | JBrowse |
| Cyphastrea salae | ENSOFVP00000007257.1 | XP_020616832.1 | protocadherin Fat 4-like [Orbicella faveolata] | P36335 Neural cell adhesion molecule 1-B OS=Xenopus laevis OX=8355 | JBrowse |
| Cyphastrea salae | ENSOFVP00000007277.1 | XP_020616832.1 | protocadherin Fat 4-like [Orbicella faveolata] | Q6V0I7 Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV= | JBrowse |
| Cyphastrea salae | ENSOFVP00000007302.1 | XP_020616832.1 | protocadherin Fat 4-like [Orbicella faveolata] | Q2PZL6 Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV | JBrowse |
| Cyphastrea salae | ENSOFVP00000009438.1 | XP_020606784.1 | cadherin-23-like, partial [Orbicella faveolata] | Q2PZL6 Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV | JBrowse |
| Cyphastrea salae | ENSOFVP00000018885.1 | XP_020608803.1 | uncharacterized protein LOC110047401 [Orbicella faveolata] | Q9NYQ7 Cadherin EGF LAG seven-pass G-type receptor 3 OS=Homo sapien | JBrowse |
| Cyphastrea salae | ENSOFVP00000026264.1 | XP_020612891.1 | uncharacterized protein LOC110051211 [Orbicella faveolata] | – | JBrowse |
| Cyphastrea salae | ENSOFVP00000026268.1 | XP_020612891.1 | uncharacterized protein LOC110051211 [Orbicella faveolata] | – | JBrowse |
| Cyphastrea salae | ENSOFVP00000029181.1 | XP_020625379.1 | cadherin-23-like [Orbicella faveolata] | – | JBrowse |
| Cyphastrea salae | ENSOFVP00000030396.1 | XP_020625379.1 | cadherin-23-like [Orbicella faveolata] | Q2PZL6 Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV | JBrowse |
| Cyphastrea salae | ENSOFVP00000030930.1 | XP_020625379.1 | cadherin-23-like [Orbicella faveolata] | Q2PZL6 Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV | JBrowse |
| Cyphastrea salae | ENSOFVP00000031722.1 | XP_020625379.1 | cadherin-23-like [Orbicella faveolata] | Q6V0I7 Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV= | JBrowse |
| Cyphastrea salae | ENSOFVP00000031739.1 | XP_020625379.1 | cadherin-23-like [Orbicella faveolata] | P58365 Cadherin-23 OS=Rattus norvegicus OX=10116 GN=Cdh23 PE=2 SV=1 | JBrowse |
| Cyphastrea salae | ENSOFVP00000031932.1 | XP_020625379.1 | cadherin-23-like [Orbicella faveolata] | Q6V1P9 Protocadherin-23 OS=Homo sapiens OX=9606 GN=DCHS2 PE=1 SV=2 | JBrowse |
