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Support counts the member genes carrying the term. % of genes is that count over all 2,234 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF01410 | COLFI — Fibrillar collagen C-terminal domain | 1918 / 2,234 | 85.9% | 94.4% of 2,032 | ≥80% support |
| GO | GO:0005201 Molecular Function | extracellular matrix structural constituent | 1932 / 2,234 | 86.5% | 96.1% of 2,010 | ≥80% support |
| PANTHER | PTHR24023 | COLLAGEN ALPHA | 1668 / 2,234 | 74.7% | 94.7% of 1,762 | ≥50% support |
| Pfam | PF01391 | Collagen | 1660 / 2,234 | 74.3% | 81.7% of 2,032 | ≥50% support |
| GO | GO:0005615 Cellular Component | extracellular space | 1669 / 2,234 | 74.7% | 83.0% of 2,010 | ≥50% support |
| GO | GO:0031012 Cellular Component | extracellular matrix | 1668 / 2,234 | 74.7% | 83.0% of 2,010 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Cyphastrea salae | ENSOFVP00000015799.1 | XP_020612373.1 | collagen alpha-1(I) chain-like isoform X2 [Orbicella faveolata] | Q9JI03 Collagen alpha-1(V) chain OS=Rattus norvegicus OX=10116 GN=C | JBrowse |
| Cyphastrea salae | ENSOFVP00000015807.1 | XP_020612373.1 | collagen alpha-1(I) chain-like isoform X2 [Orbicella faveolata] | Q8IZC6 Collagen alpha-1(XXVII) chain OS=Homo sapiens OX=9606 GN=COL | JBrowse |
| Cyphastrea salae | ENSOFVP00000017211.1 | XP_020615301.1 | collagen alpha-2(XI) chain-like [Orbicella faveolata] | P13942 Collagen alpha-2(XI) chain OS=Homo sapiens OX=9606 GN=COL11A | JBrowse |
| Cyphastrea salae | ENSOFVP00000017236.1 | XP_020615301.1 | collagen alpha-2(XI) chain-like [Orbicella faveolata] | P13942 Collagen alpha-2(XI) chain OS=Homo sapiens OX=9606 GN=COL11A | JBrowse |
| Cyphastrea salae | ENSOFVP00000018879.1 | CAH3019167.1 | unnamed protein product [Porites evermanni] | – | JBrowse |
| Cyphastrea salae | ENSOFVP00000020865.1 | XP_020626992.1 | collagen alpha-1(V) chain-like [Orbicella faveolata] | P12107 Collagen alpha-1(XI) chain OS=Homo sapiens OX=9606 GN=COL11A | JBrowse |
| Cyphastrea salae | ENSOFVP00000021373.1 | XP_020632463.1 | collagen alpha chain-like [Orbicella faveolata] | B8V7R6 Collagen alpha chain (Fragment) OS=Acropora millepora OX=452 | JBrowse |
| Cyphastrea salae | ENSOFVP00000021408.1 | KAJ7391977.1 | hypothetical protein OS493_016285 [Desmophyllum pertusum] | Q91717 Collagen alpha-1(II) chain OS=Xenopus laevis OX=8355 GN=col2 | JBrowse |
| Cyphastrea salae | ENSOFVP00000021689.1 | XP_020632428.1 | collagen alpha-2(I) chain-like [Orbicella faveolata] | B8V7R6 Collagen alpha chain (Fragment) OS=Acropora millepora OX=452 | JBrowse |
| Cyphastrea salae | ENSOFVP00000022395.1 | XP_020632406.1 | collagen alpha-2(I) chain-like [Orbicella faveolata] | O93484 Collagen alpha-2(I) chain OS=Oncorhynchus mykiss OX=8022 GN= | JBrowse |
| Cyphastrea salae | ENSOFVP00000022400.1 | XP_020615870.1 | collagen alpha chain-like [Orbicella faveolata] | B8V7R6 Collagen alpha chain (Fragment) OS=Acropora millepora OX=452 | JBrowse |
| Cyphastrea salae | ENSOFVP00000022429.1 | XP_020632406.1 | collagen alpha-2(I) chain-like [Orbicella faveolata] | O93484 Collagen alpha-2(I) chain OS=Oncorhynchus mykiss OX=8022 GN= | JBrowse |
| Cyphastrea salae | ENSOFVP00000022434.1 | XP_020615870.1 | collagen alpha chain-like [Orbicella faveolata] | B8V7R6 Collagen alpha chain (Fragment) OS=Acropora millepora OX=452 | JBrowse |
| Cyphastrea salae | ENSOFVP00000024271.1 | XP_020632452.1 | collagen alpha-1(II) chain-like [Orbicella faveolata] | Q91717 Collagen alpha-1(II) chain OS=Xenopus laevis OX=8355 GN=col2 | JBrowse |
| Cyphastrea salae | ENSOFVP00000024700.1 | XP_020632456.1 | collagen alpha-1(II) chain-like [Orbicella faveolata] | P13941 Collagen alpha-1(III) chain OS=Rattus norvegicus OX=10116 GN | JBrowse |
| Cyphastrea salae | ENSOFVP00000024717.1 | XP_020632456.1 | collagen alpha-1(II) chain-like [Orbicella faveolata] | P13941 Collagen alpha-1(III) chain OS=Rattus norvegicus OX=10116 GN | JBrowse |
| Cyphastrea salae | ENSOFVP00000025714.1 | XP_020616319.1 | collagen alpha-1(I) chain-like [Orbicella faveolata] | Q6P4Z2 Collagen alpha-1(II) chain OS=Xenopus tropicalis OX=8364 GN= | JBrowse |
| Cyphastrea salae | ENSOFVP00000026748.1 | XP_020615886.1 | collagen alpha chain-like [Orbicella faveolata] | B8V7R6 Collagen alpha chain (Fragment) OS=Acropora millepora OX=452 | JBrowse |
