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Support counts the member genes carrying the term. % of genes is that count over all 1,120 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 993 / 1,120 | 88.7% | 100.0% of 993 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 1006 / 1,120 | 89.8% | 100.0% of 1,006 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 994 / 1,120 | 88.8% | 98.8% of 1,006 | ≥80% support |
| PANTHER | PTHR23003 | RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN | 747 / 1,120 | 66.7% | 75.6% of 988 | ≥50% support |
| GO | GO:0003729 Molecular Function | mRNA binding | 748 / 1,120 | 66.8% | 74.4% of 1,006 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 748 / 1,120 | 66.8% | 74.4% of 1,006 | ≥50% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 748 / 1,120 | 66.8% | 74.4% of 1,006 | ≥50% support |
| KEGG | K12893 | SRSF4_5_6, SFRS4_5_6 — Spliceosome | 616 / 1,120 | 55.0% | 96.9% of 636 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Cyphastrea salae | ENSOFVP00000012127.1 | XP_020631779.1 | serine/arginine-rich splicing factor 5-like [Orbicella faveolata] | P26686 Serine-arginine protein 55 OS=Drosophila melanogaster OX=722 | JBrowse |
| Cyphastrea salae | ENSOFVP00000012137.1 | XP_020631779.1 | serine/arginine-rich splicing factor 5-like [Orbicella faveolata] | Q13247 Serine/arginine-rich splicing factor 6 OS=Homo sapiens OX=96 | JBrowse |
| Cyphastrea salae | ENSOFVP00000018926.1 | RMX53927.1 | hypothetical protein pdam_00010702 [Pocillopora damicornis] | Q13247 Serine/arginine-rich splicing factor 6 OS=Homo sapiens OX=96 | JBrowse |
| Cyphastrea salae | ENSOFVP00000018937.1 | RMX53927.1 | hypothetical protein pdam_00010702 [Pocillopora damicornis] | Q13247 Serine/arginine-rich splicing factor 6 OS=Homo sapiens OX=96 | JBrowse |
| Cyphastrea salae | ENSOFVP00000029153.1 | XP_020623282.1 | serine/arginine-rich splicing factor 5-like [Orbicella faveolata] | P26686 Serine-arginine protein 55 OS=Drosophila melanogaster OX=722 | JBrowse |
| Cyphastrea salae | ENSOFVP00000030035.1 | XP_020620227.1 | serine/arginine-rich splicing factor 6-like isoform X2 [Orbicella faveolata] | Q3TWW8 Serine/arginine-rich splicing factor 6 OS=Mus musculus OX=10 | JBrowse |
| Cyphastrea salae | ENSOFVP00000030041.1 | XP_027046860.1 | serine/arginine-rich splicing factor 6-like isoform X2 [Pocillopora damicornis] | Q3TWW8 Serine/arginine-rich splicing factor 6 OS=Mus musculus OX=10 | JBrowse |
| Cyphastrea salae | ENSOFVP00000031439.1 | XP_020623282.1 | serine/arginine-rich splicing factor 5-like [Orbicella faveolata] | Q13247 Serine/arginine-rich splicing factor 6 OS=Homo sapiens OX=96 | JBrowse |
| Cyphastrea salae | ENSOFVP00000035122.1 | XP_020606311.1 | serine/arginine-rich splicing factor 4-like [Orbicella faveolata] | Q8VE97 Serine/arginine-rich splicing factor 4 OS=Mus musculus OX=10 | JBrowse |
| Cyphastrea salae | ENSOFVP00000035126.1 | XP_020606311.1 | serine/arginine-rich splicing factor 4-like [Orbicella faveolata] | Q8VE97 Serine/arginine-rich splicing factor 4 OS=Mus musculus OX=10 | JBrowse |
