← Back to the gene family browser
This orthogroup contains 868 genes from 143 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 868 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 766 / 868 | 88.3% | 100.0% of 766 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 767 / 868 | 88.4% | 100.0% of 767 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 766 / 868 | 88.3% | 99.9% of 767 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Cyphastrea salae | ENSOFVP00000000788.1 | XP_020632349.1 | glycine-rich RNA-binding protein 1-like [Orbicella faveolata] | Q08935 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylve | JBrowse |
| Cyphastrea salae | ENSOFVP00000001053.1 | XP_020632348.1 | glycine-rich RNA-binding protein 1-like [Orbicella faveolata] | Q05966 Glycine-rich RNA-binding protein 10 OS=Brassica napus OX=370 | JBrowse |
| Cyphastrea salae | ENSOFVP00000001813.1 | XP_020632348.1 | glycine-rich RNA-binding protein 1-like [Orbicella faveolata] | Q03251 Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana O | JBrowse |
| Cyphastrea salae | ENSOFVP00000004154.1 | XP_022798565.1 | RNA-binding motif protein, X chromosome-like isoform X2 [Stylophora pistillata] | Q9PTX2 Cold-inducible RNA-binding protein OS=Aquarana catesbeiana O | JBrowse |
| Cyphastrea salae | ENSOFVP00000004165.1 | XP_022798572.1 | RNA-binding motif protein, X chromosome-like isoform X3 [Stylophora pistillata] | Q9PTX2 Cold-inducible RNA-binding protein OS=Aquarana catesbeiana O | JBrowse |
| Cyphastrea salae | ENSOFVP00000011954.1 | XP_015776432.1 | PREDICTED: glycine-rich RNA-binding protein 10-like [Acropora digitifera] | Q9ZUU4 RNA-binding protein CP29B, chloroplastic OS=Arabidopsis thal | JBrowse |
| Cyphastrea salae | ENSOFVP00000025523.1 | CAH3137139.1 | unnamed protein product [Porites lobata] | P41891 Protein gar2 OS=Schizosaccharomyces pombe (strain 972 / ATCC | JBrowse |
| Cyphastrea salae | ENSOFVP00000034971.1 | XP_020632349.1 | glycine-rich RNA-binding protein 1-like [Orbicella faveolata] | Q08935 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylve | JBrowse |
