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This orthogroup contains 543 genes from 147 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 543 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR12566 | CYTOPLASMIC POLYADENYLATION ELEMENT BINDING PROTEIN CPEB | 451 / 543 | 83.1% | 100.0% of 451 | ≥80% support |
| GO | GO:0003730 Molecular Function | mRNA 3'-UTR binding | 451 / 543 | 83.1% | 100.0% of 451 | ≥80% support |
| GO | GO:0006417 Biological Process | regulation of translation | 451 / 543 | 83.1% | 100.0% of 451 | ≥80% support |
| GO | GO:0045182 Molecular Function | translation regulator activity | 451 / 543 | 83.1% | 100.0% of 451 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 443 / 543 | 81.6% | 98.2% of 451 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 435 / 543 | 80.1% | 96.5% of 451 | ≥80% support |
| Pfam | PF16367 | RRM_7 — RNA recognition motif | 426 / 543 | 78.5% | 94.9% of 449 | ≥50% support |
| Pfam | PF16366 | CEBP_ZZ — Cytoplasmic polyadenylation element-binding protein ZZ domain | 414 / 543 | 76.2% | 92.2% of 449 | ≥50% support |
| KEGG | K02602 | CPEB, ORB — Messenger RNA biogenesis | 415 / 543 | 76.4% | 99.3% of 418 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Cyphastrea salae | ENSOFVP00000019381.1 | XP_020619538.1 | cytoplasmic polyadenylation element-binding protein 1-like [Orbicella faveolata] | Q5R733 Cytoplasmic polyadenylation element-binding protein 1 OS=Pon | JBrowse |
| Cyphastrea salae | ENSOFVP00000019392.1 | XP_020619538.1 | cytoplasmic polyadenylation element-binding protein 1-like [Orbicella faveolata] | Q5R733 Cytoplasmic polyadenylation element-binding protein 1 OS=Pon | JBrowse |
| Cyphastrea salae | ENSOFVP00000020903.1 | EDO48703.1 | predicted protein, partial [Nematostella vectensis] | Q812E0 Cytoplasmic polyadenylation element-binding protein 2 OS=Mus | JBrowse |
| Cyphastrea salae | ENSOFVP00000020909.1 | XP_020610399.1 | cytoplasmic polyadenylation element-binding protein 2-like [Orbicella faveolata] | Q812E0 Cytoplasmic polyadenylation element-binding protein 2 OS=Mus | JBrowse |
