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This orthogroup contains 509 genes from 145 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 509 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR23043 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA | 454 / 509 | 89.2% | 100.0% of 454 | ≥80% support |
| GO | GO:0000977 Molecular Function | RNA polymerase II transcription regulatory region sequence-specific DNA binding | 454 / 509 | 89.2% | 99.8% of 455 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 454 / 509 | 89.2% | 99.8% of 455 | ≥80% support |
| GO | GO:0046983 Molecular Function | protein dimerization activity | 410 / 509 | 80.6% | 90.1% of 455 | ≥80% support |
| Pfam | PF00989 | PAS | 399 / 509 | 78.4% | 87.1% of 458 | ≥50% support |
| Pfam | PF14598 | PAS_11 — PAS domain | 339 / 509 | 66.6% | 74.0% of 458 | ≥50% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 405 / 509 | 79.6% | 89.0% of 455 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Cyphastrea salae | ENSOFVP00000013786.1 | XP_020630368.1 | hypoxia-inducible factor 1-alpha-like [Orbicella faveolata] | Q0PGG7 Hypoxia-inducible factor 1-alpha OS=Bos mutus grunniens OX=3 | JBrowse |
| Cyphastrea salae | ENSOFVP00000013793.1 | XP_020630368.1 | hypoxia-inducible factor 1-alpha-like [Orbicella faveolata] | Q0PGG7 Hypoxia-inducible factor 1-alpha OS=Bos mutus grunniens OX=3 | JBrowse |
| Cyphastrea salae | ENSOFVP00000013825.1 | XP_020600649.1 | uncharacterized protein LOC110039840 isoform X1 [Orbicella faveolata] | Q9QZQ0 Neuronal PAS domain-containing protein 3 OS=Mus musculus OX= | JBrowse |
| Cyphastrea salae | ENSOFVP00000013842.1 | XP_020600651.1 | uncharacterized protein LOC110039840 isoform X3 [Orbicella faveolata] | Q8IXF0 Neuronal PAS domain-containing protein 3 OS=Homo sapiens OX= | JBrowse |
| Cyphastrea salae | ENSOFVP00000013853.1 | XP_020600649.1 | uncharacterized protein LOC110039840 isoform X1 [Orbicella faveolata] | Q8IXF0 Neuronal PAS domain-containing protein 3 OS=Homo sapiens OX= | JBrowse |
