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This orthogroup contains 335 genes from 143 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 335 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10553 | SMALL NUCLEAR RIBONUCLEOPROTEIN | 300 / 335 | 89.6% | 100.0% of 300 | ≥80% support |
| Pfam | PF01423 | LSM | 295 / 335 | 88.1% | 100.0% of 295 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 300 / 335 | 89.6% | 100.0% of 300 | ≥80% support |
| GO | GO:0005689 Cellular Component | U12-type spliceosomal complex | 300 / 335 | 89.6% | 100.0% of 300 | ≥80% support |
| GO | GO:0071004 Cellular Component | U2-type prespliceosome | 300 / 335 | 89.6% | 100.0% of 300 | ≥80% support |
| GO | GO:0071013 Cellular Component | catalytic step 2 spliceosome | 300 / 335 | 89.6% | 100.0% of 300 | ≥80% support |
| GO | GO:0097526 Cellular Component | spliceosomal tri-snRNP complex | 300 / 335 | 89.6% | 100.0% of 300 | ≥80% support |
| GO | GO:1990904 Cellular Component | ribonucleoprotein complex | 300 / 335 | 89.6% | 100.0% of 300 | ≥80% support |
| GO | GO:0000398 Biological Process | mRNA splicing, via spliceosome | 299 / 335 | 89.3% | 99.7% of 300 | ≥80% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Cyphastrea salae | ENSOFVP00000019347.1 | XP_020611063.1 | small nuclear ribonucleoprotein G-like [Orbicella faveolata] | Q3ZBL0 Small nuclear ribonucleoprotein G OS=Bos taurus OX=9913 GN=S | JBrowse |
| Cyphastrea salae | ENSOFVP00000021767.1 | CAH3030751.1 | unnamed protein product, partial [Porites evermanni] | Q9UK45 U6 snRNA-associated Sm-like protein LSm7 OS=Homo sapiens OX= | JBrowse |
