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This orthogroup contains 327 genes from 139 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 327 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11492 | NUCLEAR FACTOR I | 288 / 327 | 88.1% | 99.3% of 290 | ≥80% support |
| GO | GO:0003700 Molecular Function | DNA-binding transcription factor activity | 290 / 327 | 88.7% | 99.3% of 292 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 290 / 327 | 88.7% | 99.3% of 292 | ≥80% support |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 290 / 327 | 88.7% | 99.3% of 292 | ≥80% support |
| GO | GO:0000978 Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 288 / 327 | 88.1% | 98.6% of 292 | ≥80% support |
| GO | GO:0000981 Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | 288 / 327 | 88.1% | 98.6% of 292 | ≥80% support |
| GO | GO:0006357 Biological Process | regulation of transcription by RNA polymerase II | 288 / 327 | 88.1% | 98.6% of 292 | ≥80% support |
| Pfam | PF03165 | MH1 | 232 / 327 | 71.0% | 83.2% of 279 | ≥50% support |
| Pfam | PF10524 | NfI_DNAbd_pre-N — Nuclear factor I protein pre-N-terminus | 218 / 327 | 66.7% | 78.1% of 279 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Cyphastrea salae | ENSOFVP00000006798.1 | XP_020629147.1 | nuclear factor 1 C-type-like isoform X1 [Orbicella faveolata] | P13623 Nuclear factor 1 X-type OS=Mesocricetus auratus OX=10036 GN= | JBrowse |
