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This orthogroup contains 294 genes from 147 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 294 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR23003 | RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN | 246 / 294 | 83.7% | 99.2% of 248 | ≥80% support |
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 262 / 294 | 89.1% | 100.0% of 262 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 262 / 294 | 89.1% | 100.0% of 262 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 262 / 294 | 89.1% | 100.0% of 262 | ≥80% support |
| GO | GO:0003729 Molecular Function | mRNA binding | 246 / 294 | 83.7% | 93.9% of 262 | ≥80% support |
| GO | GO:0005634 Cellular Component | nucleus | 246 / 294 | 83.7% | 93.9% of 262 | ≥80% support |
| GO | GO:0005737 Cellular Component | cytoplasm | 246 / 294 | 83.7% | 93.9% of 262 | ≥80% support |
| KEGG | K12890 | SRSF1, SFRS1, ASF, SF2 — Spliceosome | 233 / 294 | 79.3% | 100.0% of 233 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Cyphastrea salae | ENSOFVP00000012484.1 | XP_020607821.1 | serine/arginine-rich splicing factor 1A-like [Orbicella faveolata] | Q6NYA0 Serine/arginine-rich splicing factor 1B OS=Danio rerio OX=79 | JBrowse |
