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This orthogroup contains 276 genes from 143 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 276 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR10322 | DNA POLYMERASE CATALYTIC SUBUNIT | 242 / 276 | 87.7% | 99.6% of 243 | ≥80% support |
| Pfam | PF00136 | DNA_pol_B — DNA polymerase family B | 221 / 276 | 80.1% | 92.5% of 239 | ≥80% support |
| GO | GO:0003887 Molecular Function | DNA-directed DNA polymerase activity | 243 / 276 | 88.0% | 99.6% of 244 | ≥80% support |
| GO | GO:0008296 Molecular Function | 3'-5'-DNA exonuclease activity | 241 / 276 | 87.3% | 98.8% of 244 | ≥80% support |
| GO | GO:0045004 Biological Process | DNA replication proofreading | 241 / 276 | 87.3% | 98.8% of 244 | ≥80% support |
| GO | GO:0006261 Biological Process | DNA-templated DNA replication | 240 / 276 | 87.0% | 98.4% of 244 | ≥80% support |
| GO | GO:0006287 Biological Process | base-excision repair, gap-filling | 239 / 276 | 86.6% | 98.0% of 244 | ≥80% support |
| GO | GO:0006297 Biological Process | nucleotide-excision repair, DNA gap filling | 239 / 276 | 86.6% | 98.0% of 244 | ≥80% support |
| GO | GO:0043625 Cellular Component | delta DNA polymerase complex | 239 / 276 | 86.6% | 98.0% of 244 | ≥80% support |
| GO | GO:0000166 Molecular Function | nucleotide binding | 225 / 276 | 81.5% | 92.2% of 244 | ≥80% support |
| GO | GO:0003677 Molecular Function | DNA binding | 221 / 276 | 80.1% | 90.6% of 244 | ≥80% support |
| Pfam | PF03104 | DNA_pol_B_exo1 — DNA polymerase family B, exonuclease domain | 190 / 276 | 68.8% | 79.5% of 239 | ≥50% support |
| Pfam | PF14260 | zf-C4pol — C4-type zinc-finger of DNA polymerase delta | 184 / 276 | 66.7% | 77.0% of 239 | ≥50% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 215 / 276 | 77.9% | 88.1% of 244 | ≥50% support |
| KEGG | K02327 | POLD1 — DNA repair and recombination proteins | 170 / 276 | 61.6% | 96.6% of 176 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Cyphastrea salae | ENSOFVP00000032343.1 | XP_020620662.1 | DNA polymerase delta catalytic subunit-like [Orbicella faveolata] | P52431 DNA polymerase delta catalytic subunit OS=Mus musculus OX=10 | JBrowse |
