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This orthogroup contains 255 genes from 142 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 255 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR11807 | ATPASES OF THE PP SUPERFAMILY-RELATED | 224 / 255 | 87.8% | 99.6% of 225 | ≥80% support |
| GO | GO:0000049 Molecular Function | tRNA binding | 224 / 255 | 87.8% | 100.0% of 224 | ≥80% support |
| GO | GO:0002143 Biological Process | tRNA wobble position uridine thiolation | 224 / 255 | 87.8% | 100.0% of 224 | ≥80% support |
| GO | GO:0002144 Cellular Component | cytosolic tRNA wobble base thiouridylase complex | 224 / 255 | 87.8% | 100.0% of 224 | ≥80% support |
| GO | GO:0005739 Cellular Component | mitochondrion | 224 / 255 | 87.8% | 100.0% of 224 | ≥80% support |
| Pfam | PF16503 | zn-ribbon_14 — Zinc-ribbon | 183 / 255 | 71.8% | 91.0% of 201 | ≥50% support |
| Pfam | PF01171 | ATP_bind_3 — PP-loop family | 173 / 255 | 67.8% | 86.1% of 201 | ≥50% support |
| GO | GO:0002098 Biological Process | tRNA wobble uridine modification | 169 / 255 | 66.3% | 75.5% of 224 | ≥50% support |
| GO | GO:0034227 Biological Process | tRNA thio-modification | 169 / 255 | 66.3% | 75.5% of 224 | ≥50% support |
| GO | GO:0008033 Biological Process | tRNA processing | 164 / 255 | 64.3% | 73.2% of 224 | ≥50% support |
| KEGG | K14168 | CTU1, NCS6 — Transfer RNA biogenesis | 175 / 255 | 68.6% | 98.9% of 177 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Cyphastrea salae | ENSOFVP00000028346.1 | XP_022797245.1 | cytoplasmic tRNA 2-thiolation protein 1-like [Stylophora pistillata] | Q803X1 Cytoplasmic tRNA 2-thiolation protein 1 OS=Danio rerio OX=79 | JBrowse |
| Cyphastrea salae | ENSOFVP00000028357.1 | XP_022797245.1 | cytoplasmic tRNA 2-thiolation protein 1-like [Stylophora pistillata] | Q803X1 Cytoplasmic tRNA 2-thiolation protein 1 OS=Danio rerio OX=79 | JBrowse |
